Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 1e-26
seq8 105 5e-18
>seq3
Length=1410883
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | || || || ||||| |||||||| || |
Sbjct 317556 CCACCTCTCAATCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGAC 317615
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || | ||||| ||||| | || |||||||||||||| || |||
Sbjct 317616 AAGGTTCTGCCATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGGA 317675
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||||| |||||| | || | ||||||||| ||| ||
Sbjct 317676 ATACCTTCCTTGTCTTG-AATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGAC 317734
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | || ||||| || || ||||| || ||||| || || ||||| ||
Sbjct 317735 CTCTAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCATGTT 317785
>seq8
Length=1028784
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || ||||| | || ||||| ||||| ||||| || || |
Sbjct 325716 CCACCTCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 325657
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || || | |||||| ||||| | |||||||||||||| || || |||
Sbjct 325656 AAGGTTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGA 325597
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | || ||||| | || | |||||||| ||| ||
Sbjct 325596 ATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGACC 325537
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| | || ||||| || || ||||| || ||||| || || ||||||
Sbjct 325536 TCCAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATT 325489
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | || ||||| ||||||||||| || || |
Sbjct 326172 CCACCTCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGAT 326113
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || | |||||| ||||| | ||||||||||| || || || ||
Sbjct 326112 AATGTTCTGCCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGG 326053
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | || ||||| | || | ||||||||| || |||
Sbjct 326052 ATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCAATAGTGTCAGAGGACTCAACT 325993
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || ||||| ||||| || || || || || || |||||
Sbjct 325992 TCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | |||||||| ||||||||||| || || |
Sbjct 326400 CCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 326341
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || || | |||||| || ||| | || |||||||| || || || ||
Sbjct 326340 AAGGTTCTTCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGG 326281
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | || ||||| | || | ||| |||||| || |||
Sbjct 326280 ATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACT 326221
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || ||||| || || || || || || || || |||||
Sbjct 326220 TCCAAAGTGATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||||| | |||||||| ||||||||||| || || |
Sbjct 325944 CCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 325885
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || | |||||| || || | || |||||||| || || || ||
Sbjct 325884 AATGTTCTGCCGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGG 325825
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || || ||||| |||||| | ||||| | || | ||||| ||| || ||
Sbjct 325824 ATACCTTCCTTATCTTG-AATTTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGAC 325766
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || ||||| || || || || || || |||||
Sbjct 325765 CTCTAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219157746269
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