Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 1e-19
seq3 93.3 1e-13
>seq2
Length=1812747
Score = 113 bits (124), Expect = 1e-19
Identities = 116/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395
|||||||| || ||||| ||||||||||||| ||||||||||||| |||||||| |
Sbjct 1068355 TTCAATAGACAGCCATCTTTGCATAAAATGTCAATGATGGCTCATAGGGTCAAAGTCATG 1068296
Query 305396 TCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGAT 305455
|| | ||||| |||| ||| | || | | | || ||||| |||||||| |||
Sbjct 1068295 CCTTATTCTACATTCAGATTGAATTTGTCTGTTACTTCTCCATATAACGCGGATTTCGAT 1068236
Query 305456 GGAGATGAAATGAATATGCATGTACCTCAATC 305487
|| |||||||||||| |||| || || |||||
Sbjct 1068235 GGTGATGAAATGAATTTGCACGTTCCCCAATC 1068204
>seq3
Length=1410883
Score = 93.3 bits (102), Expect = 1e-13
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 305312 TTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATG 305371
||||| ||| |||| || || || ||||| ||||| || |||||| |||||||
Sbjct 230044 TTGAA-GACTTTGATATAGTACTTTTTAATAGACAACCTTCGTTGCATAGGTTGTCTATT 229986
Query 305372 ATGGCTCATAAAGTCAAAGTATTATC-TGGATTGACATTTC-GATTAAATGTAAGTGCTT 305429
| | ||| | | || | || | |||| || |||| |||| || | | ||| ||
Sbjct 229985 TTATCACATTATGCCAGAATAAAGCCATGGA--GAACTTTCAGATTGAACGAATGTGTTT 229928
Query 305430 GTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
|||| |||||||||||||| |||||||||||||||||||| | |||||||| |||
Sbjct 229927 GTACTCCTTATAATGCGGACTTTGATGGAGATGAAATGAACCTACATGTACCCCAA 229872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812663145649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |