Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq8 116 9e-21
seq3 98.7 2e-15
>seq8
Length=1028784
Score = 116 bits (128), Expect = 9e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| |||||||| |||||||||||||| || |||||| || |||| || |||
Sbjct 326198 ACCGGAAAAACAATCACTTTGGAAGTTGAGTCTTCTGATACTATCGACAACGTCAAGAGT 326257
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| |||||| | ||||| ||||| ||
Sbjct 326258 AAGATCCAAGATAAGGAAGGTATCCCACCAGACCAACAAAGATTAATCTTTGCCGGTAAA 326317
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| ||||| || ||| |||| |||||| | || || || || ||| | ||
Sbjct 326318 CAATTGGAAGACGGAAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACAT 326377
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 326378 TTGGTTTTGAGA 326389
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| |||||||| |||||||||||||| || |||||||| | || || |||
Sbjct 325970 ACTGGAAAAACAATCACTTTGGAAGTTGAGTCCTCTGACACTATTGACAACGTCAAGAGT 326029
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| |||||| | || ||||| || ||
Sbjct 326030 AAGATCCAAGATAAGGAAGGTATCCCACCAGACCAACAAAGATTGATTTTCGCTGGTAAA 326089
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| || ||||| || || || || | || |||||| | || || || |||||| | ||
Sbjct 326090 CAATTAGAAGACGGCAGAACATTATCAGACTACAACATTCAAAAGGAATCTACTTTACAT 326149
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 326150 TTGGTTTTGAGA 326161
Score = 87.8 bits (96), Expect = 4e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| |||||||| || ||||||||||| || |||||||| | || || |||
Sbjct 326426 ACTGGAAAAACTATTACTTTGGAAGTTGAGTCCTCTGACACTATTGACAATGTCAAGAGT 326485
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| ||| || ||| ||||| | || ||||| || ||
Sbjct 326486 AAGATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAAAGGTTGATTTTCGCTGGTAAA 326545
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || || ||| | || ||||| | || || || || ||| | ||
Sbjct 326546 CAATTGGAAGACGGTAGAACATTGTCGGACTACAATATTCAAAAGGAATCCACTTTACAT 326605
Query 206374 CTTGTTTTGAG 206384
| ||||||||
Sbjct 326606 TTGGTTTTGAG 326616
>seq3
Length=1410883
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||| || || || || || || || ||| |||||||| | || || ||| |
Sbjct 317758 ACAGGTAAGACTATTACCTTAGAGGTCGAATCCTCTGACACTATTGACAATGTCAAGTCA 317699
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|| |||||||| || ||||| ||| || || |||||| | |||||||| || ||
Sbjct 317698 AAAATTCAAGACAAGGAAGGTATTCCACCTGATCAGCAAAGATTAATCTTCGCTGGTAAA 317639
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||||||||| || || ||| | || || ||| |||| || |||||||| | ||
Sbjct 317638 CAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAGGAGTCTACCTTGCAT 317579
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 317578 TTGGTCTTGAGA 317567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820663721289
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |