Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq8 102 8e-17
seq3 98.7 9e-16
>seq8
Length=1028784
Score = 102 bits (112), Expect = 8e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | |||||||||||||| | || || |||||||||||||||||| || ||| |
Sbjct 326392 CAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCT 326333
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||||| | |||||||||| | |||||| | ||||| ||||| || || |||||
Sbjct 326332 TCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGGATACCTTC 326273
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| || || || | | || | |||||| | | ||| ||||| | ||
Sbjct 326272 CTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACTTCCAAAGT 326213
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| ||||| || |||| ||| || | |||||| |||||
Sbjct 326212 GATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTAC 131963
||| | |||||||||||||| | || || ||||||||||||||||| | | ||| |
Sbjct 325936 CAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAATGTTCT 325877
Query 131964 GCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTT 132023
|| ||||| | |||||||||| | |||| | ||||| ||||| || || ||||
Sbjct 325876 GC-CGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTT 325818
Query 132024 CTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCG 132083
| ||||| |||||| || | | || | || |||| | ||| || || | |
Sbjct 325817 CCTTATCTTGAATTTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGACCTCTAAGG 325758
Query 132084 TCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| | || |||||||||| ||| || | ||| || |||||
Sbjct 325757 TAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
>seq3
Length=1410883
Score = 98.7 bits (108), Expect = 9e-16
Identities = 283/426 (66%), Gaps = 16/426 (4%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCT-GAGATACACATTGCTAGTGAAAGG 146951
||||| | ||| ||||| || |||| || | ||| ||| || | || |||| | ||
Sbjct 803002 TTGACTATTTGGAACTCACCAGCCAATACTCTTCTCGAG-TAGATGTTCGAAGTGTATGG 802944
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
|||||| | || || |||||||| ||||| | |||| || |||||||| || ||
Sbjct 802943 CTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGAGCAAC 802884
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071
| |||||| |||| || ||| | | ||||| | |||||| || | |||||||||
Sbjct 802883 AAGCAATGAGTTTCTCAAACCATGCTTTGCCATGTTTTGCTTCAATGTGTCCCAGTCCCA 802824
Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTG---GAGCACTCCTCGA--CTGG 147124
|| ||| | ||| | || ||||| ||| ||||| ||| || | |||| |||
Sbjct 802823 CAATTCG--GTAGGCTTTCTGTCCCACAAGTCATACTGCAAGAG-ACCCTTCGATGCTG- 802768
Query 147125 CGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCT 147184
|||| ||| || | || ||| | || ||| | ||||| ||| | |||||
Sbjct 802767 -GGGA--GCCTTCGTAGGTCTCGTATGTCCCTTCGACTTCTGCCAACTCAATGGATGCCT 802711
Query 147185 CGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGC 147244
| | || |||| ||| || || || |||||| |||| | | | |||||||
Sbjct 802710 CCACAGCACCATGGTAGATTGTCTCAAAGATTTGAATGTTCAATTCCCTGGCTTCTTGAG 802651
Query 147245 TCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGA 147304
||| | |||| | || | || ||||||||||| | ||| |||| |||||| | |
Sbjct 802650 AATCGAATGGCAACCTCAAAGCCATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAA 802591
Query 147305 TAGGTC 147310
| ||||
Sbjct 802590 TTGGTC 802585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611146381240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |