Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-19 >seq3 Length=1410883 Score = 114 bits (126), Expect = 2e-19 Identities = 174/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 259934 TTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCC 259993 || ||||| || || || | || || | || |||||||| || | | |||||||| Sbjct 801696 TTCAATGCTGGTACACCACAACCACAAATGTCTTCGTGCTTCTTGGTTGCCATGAAGGAA 801755 Query 259994 GATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCC 260053 || || ||||| || |||||||||||| | ||| ||| || | || |||||| || Sbjct 801756 GACTCCATCGACGGTATCTATGACACGTTGAAGACGTGTGCTTTGATTTCCAAGAGTGCT 801815 Query 260054 GGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACC 260113 || || || ||||| | || || | || | |||| |||||| | || || ||| Sbjct 801816 GGTGGTATTGGTTTGCACATCCATAATATTCGTTCAACGGGTGCCTACATTGCCGGAACC 801875 Query 260114 AACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTAC 260173 ||||| |||||||| || | |||||| ||||||| |||||| |||| || || ||| Sbjct 801876 AACGGTACCTCCAACGGTATTATTCCCATGGTTCGCGTCTTTAACAACACAGCTCGTTAC 801935 Query 260174 GTCGACCA 260181 || || || Sbjct 801936 GTGGATCA 801943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810331933458