Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 280 2e-70
>seq3
Length=1410883
Score = 280 bits (310), Expect = 2e-70
Identities = 1340/2107 (64%), Gaps = 67/2107 (3%)
Strand=Plus/Minus
Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472
|||||||||||||| |||| || |||| |||||||||||||| || | |||
Sbjct 803302 TAGTACATACCGGTCTTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTTG 803243
Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532
| || || || ||||| || | ||| || ||| ||||||||||| |
Sbjct 803242 CCCATGGTAGGGTCTTTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGAT 803183
Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592
|| || || ||||| | || ||| |||||| | || ||||| | || || | |
Sbjct 803182 CTGTCGGCTGCCATGTCGATGATATGCTTTTGGGATATCTCCCACACGGTTTTGTACAAT 803123
Query 68593 TGTTTGATATCATCTGGAAGGCTCGTATT---TTGAATGGATCCACCATCGGATATAATT 68649
||||||| |||||||||| | | | ||| || || || || || || ||
Sbjct 803122 TGTTTGAGCTCATCTGGAATGTTGGGCAACGATTGGATCGAACCGTTATTTGAAATGATA 803063
Query 68650 ATATTCTTGATCTCATCATTCCA------CAATTTTCTCTCCGTTAAAACTCTAAGGAGA 68703
|||| || || | || ||||| ||| || | || || || ||
Sbjct 803062 TTATTTTTCATATTGTCGTTCCAAAGACCCAAATTGACCA-----AATCCTTCAACAAG- 803009
Query 68704 TGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTA 68763
| || || |||||||| || || |||| || ||||| | | ||| || || ||
Sbjct 803008 TATGGGTTGACTATTTGGAACTCACCAGCCAATACTCTTCTCGAGTAGATGTTCGAAGTG 802949
Query 68764 TATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGT 68823
||||| || | |||| || || || | |||||| | || || ||||| ||||||||
Sbjct 802948 TATGGCTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGA 802889
Query 68824 GCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAA 68883
|| || | || ||||| | |||||| || || || | || | |||| ||| |
Sbjct 802888 GCAACAAGCAATGAGTTTCTCAAACCATGCTTTGCCATGTTTTGCTTCA-ATGTGTCCCA 802830
Query 68884 -TCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGC 68942
||||| | || | || | ||| | || || || | | || || |||
Sbjct 802829 GTCCCACAATTCGGTAGGCTTTCTGTCCCACAAGTCATACTGCAAGAGACCCTTCGATGC 802770
Query 68943 ATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTC 69002
|| || | || || || || | ||||| ||| || | ||| ||||||
Sbjct 802769 TGGGGAGCCTTCGTAGGTCTCGTATGTCCCTTCGACTTCTGCCAACTCAATGGATGCCTC 802710
Query 69003 TAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACT 69062
| ||||| | || ||||| || || || | | || | || |||||| ||
Sbjct 802709 CACAGCACCATGGTAGATTGTCTCAAAGATTTGAATGTTCAATTCCCTGGCTTCTTGAGA 802650
Query 69063 ATCGAATGGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGA 69121
||||||||| || | |||| || || ||||| || | || || || || | | | |
Sbjct 802649 ATCGAATGGC-AACCTCAAAGCCATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAA 802591
Query 69122 TAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 69181
| ||||| |||||| | || || || | |||||||||| |||||||||||| || |
Sbjct 802590 TTGGTCTGTGTCTCATGTTAGATCTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAA 802531
Query 69182 TAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAA 69241
| ||| | || | || || || ||||| | || | ||||| ||||| |
Sbjct 802530 TGATTCTGTTCAAGTTACGAGTGACGGCTTTACTTATATCGTGAAGTTTTTCAAAATTAT 802471
Query 69242 ATC--------GTC-CATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGATTAC 69289
| | || |||| | ||||| | || | || |||||| | ||||
Sbjct 802470 ACCAGGTTGAAGTAGCATCACTCTCGACAAATGCAGGCAAGGATATAGATGCCAAGTTAC 802411
Query 69290 AAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATT 69349
| || || ||||||| | | | |||| | ||||| ||| | ||| |||
Sbjct 802410 ATACAGCAACCTCATCTGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATT 802351
Query 69350 TGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAA 69409
| ||| | |||| ||| | || ||| |||| |||||||| || || || ||||| || |
Sbjct 802350 TAATAATACCCAAATTCTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGA 802291
Query 69410 ACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTA 69469
| |||||||| || || | |||| || | |||| | ||| | | ||| || |
Sbjct 802290 ATGGAGTACCTGTCTCTGTTTGAGCCTCTAAGATAGCATACCATAACTTCTGAGCCTTGA 802231
Query 69470 TTACGGTCT---TGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCAT 69526
|||||| | ||| || ||| |||| |||| | || | | |||||| ||||
Sbjct 802230 ---CGGTCTGTCTTCCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCAT 802174
Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586
| || | ||| |||| || ||| |||||| || | | ||| | ||| | | ||
Sbjct 802173 CGCCGAATTTGTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTAT 802114
Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646
| || |||| |||||| || | ||| || ||||| | |||| ||| | |||||||
Sbjct 802113 TTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGG 802054
Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706
||| |||||||| || || ||| || ||| || | || || | |||||| | ||
Sbjct 802053 CTCTGTTTTCTTCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCAT 801994
Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766
|||||||||| | || | || | | | || |||| ||| ||||| || ||||| | ||
Sbjct 801993 GCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGT 801934
Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826
| | || ||||| ||| |||| | | ||| ||||||||||| || || |||| || |
Sbjct 801933 AACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGG 801874
Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886
|||| | ||| || || ||| ||||||||| || | ||| || || || |
Sbjct 801873 TTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCAG 801814
Query 69887 CCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCA 69945
| | || || || | ||||| |||| ||||| |||||||| ||||| || ||| ||
Sbjct 801813 CACTCTTGGAAATCAAAGCAC-ACGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCT 801755
Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005
|| ||||| || | || || ||||||||| | ||| || || ||||| ||
Sbjct 801754 TCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAAC 801695
Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCT 70065
|| || || || || || ||||| || ||| ||| | |||||| || |||||| |
Sbjct 801694 AAGGTTGGGGAAGCATGTGTGAAGTATCTTTGAGACATGTAATTGTAAGTCTCAATAACC 801635
Query 70066 GATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124
| ||||| | || |||||| || || || || | ||| | || || |||||||
Sbjct 801634 CGTGGGATATCATCTCT-ATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCT 801576
Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184
|| | ||| | | ||||| | ||| ||| | || | || || || || ||
Sbjct 801575 CTCGGCAACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAA 801516
Query 70185 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
|||||||| ||||| | ||| ||| |||| |||| || | | ||| | ||
Sbjct 801515 GTAGTTGTAGTTGAAGTCGCGATCGAAAACAATAGCAGAGTTCAACTCATC---AGCATT 801459
Query 70245 GGTAACTATATCCATAACAGTAGGT-------GAGATAATCGGAGATCGTTTACCATTTT 70297
|| || | | ||| | |||||| ||||| || ||||| | || | |
Sbjct 801458 GG---CTTGAACAATATC-GTAGGTCTCCTTGGAGATCATGGGAGAATGCAGGTCAGTCT 801403
Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACT-----AAATAGtttttttGT 70352
| || || | ||| | | || | || | ||||| |||| ||| | || ||||
Sbjct 801402 TTGGGTTGATATACTCG--TACAACTGC--TTACA-CACTTGTGAAAACTGCTTGATTGT 801348
Query 70353 TTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTG 70412
|| ||| || || || || | ||| ||||||||||| | |||||| ||||| || ||
Sbjct 801347 TTGCTTATGCAAGTTGGAAACGGCAATTCTGGCTGCCAAAATAGCGTAGTCTGGGTGAAT 801288
Query 70413 TGTAGTACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTC 70471
|| || || ||| || || | || || ||||| | ||||| || | || ||||| |
Sbjct 801287 CGTGGT-CATGTATGCCGCAGTCTCAGCGGCTAAGTTGTCTAACTCGGTGGTAGTAACAC 801229
Query 70472 CGTTATA 70478
| | |||
Sbjct 801228 CATGATA 801222
Score = 250 bits (276), Expect = 3e-61
Identities = 597/898 (66%), Gaps = 20/898 (2%)
Strand=Plus/Minus
Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372
||| ||||| ||||| || |||| || | || || ||||| || ||||| || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAt---ttttttttAAA 39429
||| || || ||||||||||||||||| ||||| || |||| || |||| |||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTAC- 929342
Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489
|| || ||| |||||||||||||||||||| | ||| ||||| |
Sbjct 929341 -CCAAAGCAACTAAT-AATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCT 929284
Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549
|||||| || | | || |||| || || || | ||| || ||||| ||| ||
Sbjct 929283 ATTCATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAAC 929224
Query 39550 GGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAA 39609
||| || || || ||| || | || || ||| | ||||| ||
Sbjct 929223 GGCTTCGGTGATAATCCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAA 929164
Query 39610 CATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAA 39669
|| |||||| || |||||| ||||| || |||||||| | ||| ||||||||||| ||
Sbjct 929163 CAATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAA 929104
Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729
||| || || ||||| | ||| | ||| || | ||| || || | ||||| || |||
Sbjct 929103 TGTAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACT 929044
Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT 39789
||||| || || || || || || || |||||||| | || ||| | || ||| |
Sbjct 929043 GAAGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTC 928984
Query 39790 AT-GT--ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTAT 39846
|| || ||||| || ||||| ||||| |||||||| | ||| || || | || ||
Sbjct 928983 ATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAAT 928924
Query 39847 AGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACT 39906
|||||||| | | | | || | ||| || | ||| ||||| || || | |
Sbjct 928923 TGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGA 928864
Query 39907 ATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTC 39966
|| ||||||| ||||| || || ||| || |||||||| ||||| ||| | |||||
Sbjct 928863 GTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTC 928804
Query 39967 AGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACT 40026
| || ||| || || | | || | || |||| || || || || || ||||||
Sbjct 928803 TGGAACTTGAACTTCAGCTGAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGA 928744
Query 40027 AGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA-- 40084
|| ||||| || || || | | ||| ||| | |||||| ||||| || |
Sbjct 928743 TGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCAT----TGTCATTTAACT 928688
Query 40085 -----TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACG 40139
|||||||||| | || || | || | ||| ||||| |||||||| || |
Sbjct 928687 TGTCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAG 928628
Query 40140 CCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|||| || ||||||||||| | ||| || || ||||| |||||||| | ||||||
Sbjct 928627 CCTCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908722722760
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