Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 242 3e-59
>seq3
Length=1410883
Score = 242 bits (268), Expect = 3e-59
Identities = 595/885 (67%), Gaps = 23/885 (3%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
||||| |||||||||| |||||| || || |||||||||||||||||||| ||||
Sbjct 928570 TTTGTTTTGTTTCCAATCAGATATCACGAAATCTGGCAAATGTACAAAAAAGCTGAGGCT 928629
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCA-CATTGGATTG--CA 43816
||||||||||| || || ||| |||| ||| ||| ||||| ||| | |||| | |
Sbjct 928630 TCATTTTGGACTGCTGAGGAAATTGACTTGGGTAAGGACTT-GCATGACTGGAAGGACAA 928688
Query 43817 TTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875
| ||| |||| |||| ||| || || | || || || |||||||| ||
Sbjct 928689 GTTAAATGACAATGAAAGGTTTTTCATTTCAAGAATCTTAGCTTTCTTTGCTGCATCTGA 928748
Query 43876 CGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934
|| || ||||| || || |||||| || | | || ||||||||| | |||||||
Sbjct 928749 TGGTATTGTCAACGAGAACTTGGTTGAGAATTTCTCAGC-TGAAGTTCAAGTTCCAGAAG 928807
Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994
| ||| |||||||| |||||||| || || ||||| || || |||| ||| |
Sbjct 928808 CCAAATGCTTTTATGGATTTCAAATCATGATGGAGAATATCCACTCAGAAACCTACTCTT 928867
Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGAT 44052
| |||| ||||| || ||||| ||| || ||| || | ||||||||||| ||
Sbjct 928868 TATTGATTGATACCTATATCAAGGAT--CCAAAAGAGGCTGACTTTTTGTTTAATGCAAT 928925
Query 44053 AGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATT 44108
|| |||| | | || || || | || || |||||||| | | |||||| | ||
Sbjct 928926 TGACAACATTCCATG-TATCAAGAAGAAGGCTGACTGGGCTTTGAGATGGATCAACGATG 928984
Query 44109 CAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168
| ||| | || || ||||| ||||| || || || | ||| || || ||||||||
Sbjct 928985 AAGATGCATTATTCGGTGAACGTCTTGTTGCTTTCGCTGCTGTTGAGGGTATTTTCTTCA 929044
Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228
|| || ||||| | || || ||||| ||||| ||||| ||||||| || | || |
Sbjct 929045 GTGGTTCATTTGCATCTATCTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTCTTACAT 929104
Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTAC 44288
| || || || || || | | |||||||| |||||| || ||||||||||| ||
Sbjct 929105 TCTCTAACGAATTGATTTGCAGAGATGAAGGTTTACATACTGACTTTGCTTGCTTATTGT 929164
Query 44289 TTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAAT-TACAGA-TATTGTTGTAGA 44346
| || | | || || | ||| ||| | | | ||| ||| | ||
Sbjct 929165 TCTCTCATTTGCAAAAC----AGACCAGATG-CAGAAATTGTTGAGAGGATTATCACCGA 929219
Query 44347 GGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAAT 44406
|| || | || ||| | |||||| | || ||||||||||| ||| | || ||
Sbjct 929220 AGCCGTTACCATTGAAAAGGAATTTTTCACCGATGCATTACCTGTCTCTTTGTTGGGTAT 929279
Query 44407 GAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACT 44466
|||| |||||| |||||| | |||| |||||||| | ||| | | | |
Sbjct 929280 GAATAGCAGCTTGATGTGTCAATATGTCGAATTTGTTGCAGATAGATTATTAGTTGCTTT 929339
Query 44467 GGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTT 44526
|||| ||| || || | ||| ||| || |||||||| |||||||| || || ||
Sbjct 929340 GGGTAACGAAAAGGTGTACAATGTTACAAATCCTTTTGATTTCATGGAAAACATCTCCTT 929399
Query 44527 GGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571
|| || ||||| |||||||||||||| | || | || |||||
Sbjct 929400 GGCTGGTAAAACCAACTTTTTTGAAAAGAGAGTCAGTGACTATCA 929444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455956404045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |