Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 3e-27
>seq8
Length=1028784
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | ||| | ||| ||||||||||| ||||| || |||||||| |||||||| | |
Sbjct 326172 CCACCTCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGAT 326113
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||||| || ||||||| | |||||||| ||| |||| | | ||||| || || ||
Sbjct 326112 AATGTTCTGC-CGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 326054
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||| || ||||| |||||| | || | | | || | |||||| | || |||||
Sbjct 326053 GATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCAATAGTGTCAGAGGACTCAAC 325994
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| | ||| || | ||| || |||| ||| || || ||||||||||||
Sbjct 325993 TTCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCATA 325945
Score = 123 bits (136), Expect = 2e-23
Identities = 161/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCG 27088
|||| ||| ||||||||||| || || || ||||||||||||||||| || ||||
Sbjct 326619 AACCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGACAATGTTCTA 326560
Query 27089 CTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTC 27148
| ||||||| | |||||||| ||| |||| | | || || || || || | ||| ||
Sbjct 326559 C-CGTCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGAATACCTTC 326501
Query 27149 TTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGT 27208
||||| |||||| | || | | || | |||||| | || |||||||| | |||
Sbjct 326500 CTTATCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGT 326441
Query 27209 TATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| ||| || |||| ||| || || ||||||||||||
Sbjct 326440 AATAGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCATA 326401
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||||||||| || || || |||||||| ||||||||| |
Sbjct 326400 CCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 326341
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | ||||||||||| | || | | ||||| || || ||
Sbjct 326340 AAGGTTCTTCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGG 326281
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| || ||||| |||||| | || | | | || | ||| || | | ||||||
Sbjct 326280 ATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACT 326221
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | ||| || | ||| || |||| ||| || || || |||||||||
Sbjct 326220 TCCAAAGTGATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCATA 326173
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | ||| | ||| ||||||||||| || || || |||||||| |||||||| | |
Sbjct 325944 CCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAT 325885
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
||||| || ||||||| | |||||||||||| |||| | | ||||| || || ||
Sbjct 325884 AATGTTCTGC-CGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGG 325826
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||| || ||||| || || | || | | | || | ||||| | | || ||
Sbjct 325825 GATACCTTCCTTATCTTGAATTTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGAC 325766
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| || || | || || |||| ||| || || ||||||||||||
Sbjct 325765 CTCTAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCATA 325717
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| || |||||||| ||||| || ||||| || ||||||||| |
Sbjct 325716 CCACCTCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 325657
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | |||||||| ||| |||| | | || || || || ||
Sbjct 325656 AAGGTTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGA 325597
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| || ||||| |||||| | || | | | || | ||||| | || ||| ||
Sbjct 325596 ATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGACC 325537
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | || |||| || || || | ||| || || |||||||||||
Sbjct 325536 TCCAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCAT 325490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934353390008
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