Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3 288 1e-72
seq5 93.3 5e-14
>seq3
Length=1410883
Score = 288 bits (318), Expect = 1e-72
Identities = 905/1377 (66%), Gaps = 39/1377 (3%)
Strand=Plus/Minus
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
|||||| || |||||||| || | ||||||| ||||||||| | ||||||||
Sbjct 803003 GTTGACTATTTGGAACTCACCAGCCAATACTCTTCTCGAGTAGATGTTCGAAGTGTATGG 802944
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
||||||||||| || || || || ||||| | |||||| || || ||||| || || |
Sbjct 802943 CTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGAGCAAC 802884
Query 110788 CA--AAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGTTCCTTGAGAACATCCCAGT 110843
| || || ||| | | ||| | || ||| ||| || ||| | |||||||
Sbjct 802883 AAGCAATGA--GTTTCTCAAACCATGCT--TTGCCATGTTTTGCTTCAATGTGTCCCAGT 802828
Query 110844 CGTAGT-TGAGCTTGGTTTCACCTTCCCACATGTCAAACTG-AAGCACCCCTTGGGACGC 110901
| | | | | || || | ||||||| |||| |||| ||| ||||| | | ||
Sbjct 802827 CCCACAATTCGGTAGGCTTT-CTGTCCCACAAGTCATACTGCAAGAGACCCTTCG-ATGC 802770
Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 110961
|| || || || |||| || || | |||| | |||| ||||| ||| | |||||
Sbjct 802769 TGGGGAGCCTTCGTAGGTCTCGTATGTCCCTTCGACTTCTGCCAACTCAATGGATGCCTC 802710
Query 110962 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 111021
|| | | || || || || |||||||| || |||| ||| ||||||| | ||
Sbjct 802709 CACAGCACCATGGTAGATTGTCTCAAAGATTTGAATGTTCAATTCCCTGGCTTCTTGAGA 802650
Query 111022 ATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACACCCAAACC 111078
||| |||| | | | | |||| || || |||| || |||||||| ||||| | | |
Sbjct 802649 ATCGAATG-GCAAC--CTCAAAGCCATGAAGGCATCGGCTAGACCTTGGACACCGACAGC 802593
Query 111079 AATAGGTCTGTGTCGCATATTAGA-CT-TTCGCGCAGTCTC-AACGGGATAAAAATTTCT 111135
||| |||||||||| ||| ||||| || || || ||| |||||||||| |||| |
Sbjct 802592 AATTGGTCTGTGTCTCATGTTAGATCTCTTTGCT---TCTGGAACGGGATAATAATTACG 802536
Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195
|||||||| || ||| | || || || || | || || |||||||||||| |
Sbjct 802535 GTCAATGATTCTGTTCAAGTTACGAGTGACGGCTTTACTTATATCGTGAAGTTTTTCAAA 802476
Query 111196 ATCA---AAAGTGCGAGTCTCTTCA---TTGACATACTTTGGAAGGGCGATTGATGCCAA 111249
|| | | || ||| | ||| | |||| | || | || || ||||||||
Sbjct 802475 ATTATACCAGGTTGAAGTAGCATCACTCTCGACAAATGCAGGCAAGGATATAGATGCCAA 802416
Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309
|| || ||||| |||||| | | | ||| || | ||| || ||| || |||||
Sbjct 802415 GTTACATACAGCAACCTCATCTGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGA 802356
Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369
||||| | |||||||||||||||||| |||||||||| || ||||| || || ||
Sbjct 802355 TGATTTAATAATACCCAAATTCTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAG 802296
Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGG 111428
|||| | || || || ||||| || || | | | ||||| | ||| ||| || | |
Sbjct 802295 CATGAATGGAGTACCTGTCTCTGTTTGAGCCTCTAAGATAGCATACCATAACTTCTGAGC 802236
Query 111429 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
|| | || | | | || || ||||| ||| ||| | |||| ||||
Sbjct 802235 CTTG-ACGGTCTGTCTTCCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACT 802177
Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548
| || || | ||| | | ||||| || | | || | || | || |||||
Sbjct 802176 CATCGCCGAATTTGTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTT 802117
Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608
| || ||| || | |||||||| | || || ||||||| | || ||| | ||||
Sbjct 802116 TATTTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTC 802057
Query 111609 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGATATCC 111667
| | ||||| | ||| || || || ||| |||| ||| || | |||||
Sbjct 802056 TGGCTCTGTTTTCTTCCTTACCGTGATT-CTTCCTAATGTCAACGAAATCAAAAATATCT 801998
Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723
|| |||||||| || | || | || | | || |||| | ||| ||||||
Sbjct 801997 GCATGCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTG-TTTCCACCTTGATC 801939
Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783
|| || || |||||| |||||| ||||||| ||| ||||||||||| | || |||
Sbjct 801938 CACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACC 801879
Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843
|| || || ||| | | | | | || ||||||||||| ||||||||
Sbjct 801878 GTTGGTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACC 801819
Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903
||||| | ||| || || |||||| | | | || |||||||||||| ||| ||
Sbjct 801818 ACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTCATAGATACCGTCGATGGA 801759
Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963
||| ||||| |||| | | |||||| ||||| || ||| |||||||||||||||
Sbjct 801758 GTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATT 801699
Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTC 112020
||| | |||||| | || || |||| | ||| ||||| | | ||| |||||
Sbjct 801698 GAACAAGGTTGGGGAAGCATGTGTGAAGTATCTTTGAGACATGTAATTGTAAGTCTC 801642
Score = 104 bits (114), Expect = 3e-17
Identities = 339/515 (66%), Gaps = 29/515 (6%)
Strand=Plus/Minus
Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735
||| ||||||| | |||| | ||| || ||||| ||||||||||| | ||| | |||
Sbjct 929136 ACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGGCATCATACCTCTCTT 929077
Query 122736 CTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAA 122794
||||||||| | |||| ||| ||||| || |||||| |||||||| ||| || |
Sbjct 929076 CTTCAACCAGAAGATAGATGCA-AATGAACCACTGAAGAAAATACCCTCAACAGCAGCGA 929018
Query 122795 ACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC---AAACCATTTCATTGCCC 122851
| |||| ||| ||||| |||| | | | | |||| | |||| ||| ||||
Sbjct 929017 AAGCAACAAGACGTTCACCGAATAA---TGCATCTTCATCGTTGATCCATCTCAAAGCCC 928961
Query 122852 ATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA-----CTGCTT 122906
| | |||||||||| |||||||| | | | || || | ||| || | || |
Sbjct 928960 AGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACAAAAAGTCAGCCT 928901
Query 122907 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 122966
|||| | |||||| || || | ||||||||| || || ||||| || |
Sbjct 928900 CTTT-----TGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCTGAGTGGAT 928846
Query 122967 CAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCAT 123025
| | ||| || | |||| || | || || | ||||| | ||||| |||
Sbjct 928845 ATTCTCCATCAT-GATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAACTTCAG 928787
Query 123026 CCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCA 123085
| | ||||| | | | ||||| ||||| ||||| || |||||||||| || |
Sbjct 928786 CTGAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAGAAAGCTA 928727
Query 123086 GGATGTACTT--TATGAATTTCTTTTCATTTTCATT---CAGGGTCTTCCAGTCGT-CAA 123139
|| | ||| ||||| | ||||||| ||||| | | ||||||||| | |||
Sbjct 928726 AGA--TTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTGTCCTTCCAGTCATGCAA 928669
Query 123140 GATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174
| || || ||| |||| ||| || |||||||||
Sbjct 928668 G-TCCTTACCCAAGTCAATTTCCTCAGCAGTCCAA 928635
>seq5
Length=1138348
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 164613 GTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATT 164672
||||| || ||||||| | ||||| ||||| || ||| | ||||| ||||||||
Sbjct 373023 GTTGCTCCCAGATCCGGATTAGCTGTCAAGCACGGAATTTCAACCGGTGCCGGTGTTATC 372964
Query 164673 GATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTT 164731
||| | ||||| | ||| || |||||||| ||||||||||||||| ||||| |||||
Sbjct 372963 GATGCTGACTACAGAGGGGAGGTCAAAGTTGTTCTCTTCAATCACTCCGACAAGGACTT 372905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031929346400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |