Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3 295 8e-75
seq2 93.3 5e-14
>seq3
Length=1410883
Score = 295 bits (326), Expect = 8e-75
Identities = 918/1401 (66%), Gaps = 35/1401 (2%)
Strand=Plus/Plus
Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288
|| || | ||| | || || || ||||||||| | || || || || | ||||
Sbjct 801586 ACTTGATTATGAGAGTTGCTATTGGTATTCATAGAGATGATATCCCACGGGTTATTGAGA 801645
Query 104289 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 104348
| ||| | | ||||| ||| | |||| || || | |||||| | ||||||||||
Sbjct 801646 CTTACAATTACATGTCTCAAAGATACTTCACACATGCTTCCCCAACCTTGTTCAATGCTG 801705
Query 104349 GTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 104408
|||||||| ||| |||||||| |||||| | | |||| ||||| ||||| |||
Sbjct 801706 GTACACCACAACCACAAATGTCTTCGTGCTTCTTGGTTGCCATGAAGGAAGACTCCATCG 801765
Query 104409 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 104468
|||||||||||| || | | | |||||| || || ||| | ||||| |||||||
Sbjct 801766 ACGGTATCTATGACACGTTGAAGACGTGTGCTTTGATTTCCAAGAGTGCTGGTGGTATTG 801825
Query 104469 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 104528
| ||||||||||| || | | | | | ||| || || || ||| |
Sbjct 801826 GTTTGCACATCCATAATATTCGTTCAACGGGTGCCTACATTGCCGGAACCAACGGTACCT 801885
Query 104529 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 104588
| | ||||||||||| ||| ||||||| |||||| |||||| || || || ||||||
Sbjct 801886 CCAACGGTATTATTCCCATGGTTCGCGTCTTTAACAACACAGCTCGTTACGTGGATCAAG 801945
Query 104589 CTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644
||| | |||| || | | || | || | || |||||||| || |||||
Sbjct 801946 GTGGAAA-CAAAAGACCTGGTGCCTTTGCTTTGTACATCGAACCATGGCATGCAGATATT 802004
Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCT 104703
| || ||| |||| | | || || ||| | || || | | ||| | || |
Sbjct 802005 TTTGATTTCGTTGACATTAGGAAGAATCACGGTAAGGAAGAAAA-CAGAGCCAGAGACTT 802063
Query 104704 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTG 104763
|| | ||| | ||||| || ||| | |||||||| ||||| ||| | | | | ||
Sbjct 802064 ATTTCCAGCTTTGTGGATCCCTGATTTGTTCATGAAAAGAGTAGAGCAAAATAAAGAATG 802123
Query 104764 GTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGA 104823
| || | |||| || | | || || || | | || | || || ||||| ||
Sbjct 802124 GACTTTGTTTTCCCCCAATGAAGCTCCAGGCTTGGCTGACAAATTCGGCGATGAGTTCGA 802183
Query 104824 AGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGA 104883
|| | ||| ||| ||||| |||| || | | ||| || ||| | ||
Sbjct 802184 AGAGTTGTACGAAAAATACGAAAGAGAAAACCGTGGAAGACAGACCGTCAAGGCT-CAGA 802242
Query 104884 TGTG-TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942
|| ||| | ||||| | || ||||||| ||||| ||||| |||| ||||||||| |
Sbjct 802243 AGTTATGGTATGCTATCTTAGAGGCTCAAACAGAGACAGGTACTCCATTCATGCTTTATA 802302
Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002
|||| || |||||| | |||| ||| ||||||||||||||| | || || ||||||
Sbjct 802303 AAGATGCATGTAACAAGAAGACTAACCAAAAGAATTTGGGTATTATTAAATCATCCAATT 802362
Query 105003 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 105062
| ||| || || | |||| | | ||||||| ||||| |||||| | ||||
Sbjct 802363 TGTGTTGCGAGATTGTTGAATACTCTGCTCCAGATGAGGTTGCTGTATGTAACTTGGCAT 802422
Query 105063 CAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA------TTTGATTATGAAA 105116
| || | | || | ||| || || | | || | | ||| |||||
Sbjct 802423 CTATATCCTTGCCTGCATTTGTCGAGAGTGATGCTACTTCAACCTGGTATAATTTTGAAA 802482
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
|||| ||||| | | ||| | ||||| ||| | |||||| | ||||| | ||||
Sbjct 802483 AACTTCACGATATAAGTAAAGCCGTCACTCGTAACTTGAACAGAATCATTGACCGTAATT 802542
Query 105177 TTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||| |||||| ||| || | |||||| ||||||||| | ||||||| | |||||
Sbjct 802543 ATTATCCCGTTCCAGAA-GCAAAGAGATCTAACATGAGACACAGACCAATTGCTGTCGGT 802601
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGC 105294
|| || ||||| || |||| ||||| ||||| | | |||| ||||| | |||||
Sbjct 802602 GTCCAAGGTCTAGCCGATGCCTTCATGGCTTTGAGGTTGC-CATTCGATTCTCAAGAAGC 802660
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354
| |||| | || | || |||||||| || || || | ||| | ||||| | |
Sbjct 802661 CAGGGAATTGAACATTCAAATCTTTGAGACAATCTACCATGGTGCTGTGGAGGCA--TCC 802718
Query 105355 A--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 105412
| ||||||||||| || || || |||| || |||| || || || ||||| || ||
Sbjct 802719 ATTGAGTTGGCAGAAGTCGAAGGGACATACGAGACCTACGAAGGCTCCCCAGCATC-GAA 802777
Query 105413 GGGGTGCTT-CAATTTGATATGTGGGAAGGTGAG---ACCAAGCTTCACTACGACTGGGA 105468
||| ||| || | ||| ||||||| | || ||| | | | ||||||||
Sbjct 802778 GGGTCTCTTGCAGTATGACTTGTGGGACAGAAAGCCTACCGAATT---GTGGGACTGGGA 802834
Query 105469 AGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCA 105526
| | ||| || ||| ||| || | ||| | | ||| | || | |||||
Sbjct 802835 CACATTGAAGCAAAACATGGCAA--AGCATGGTTTGAGAAACTCATTGCTTGTTGCTCCT 802892
Query 105527 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 105586
||||| || || |||||| | ||||| || || || || ||||||||||| || |||||
Sbjct 802893 ATGCCTACTGCGTCCACCTCGCAAATTTTAGGCAACAACGAATGCTTTGAGCCATACACT 802952
Query 105587 ACGAACATCTATCTGAGAAGA 105607
|||||||||| |||||||
Sbjct 802953 TCGAACATCTACTCGAGAAGA 802973
>seq2
Length=1812747
Score = 93.3 bits (102), Expect = 5e-14
Identities = 219/330 (66%), Gaps = 17/330 (5%)
Strand=Plus/Minus
Query 9609 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9668
|||||||||| |||||||| ||||||||| || | ||| ||| | || ||||| |
Sbjct 194379 TATCAAAACCGTCCATCTCAACCAAAAGTTGATTCAAAGTGGTTTCTCTCTCGTCATTAG 194320
Query 9669 CTGGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAA 9719
| ||||| |||| | | || | || || | ||||| || ||||| |
Sbjct 194319 C------ACCACTAGCATTTCCTTTGGAACGCTGTTTACCAATAGCATCGATTTCATCCA 194266
Query 9720 TGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGG 9779
|| || ||| | || |||||| ||||| || ||| | ||| || ||||| |
Sbjct 194265 CAAAAACAATGGAAGGGGCATTTTCTCGAGCAGTTTTAAACAAATCTCGAACACGAGAAG 194206
Query 9780 CGCCCACACCAACAAACATCTCCACAAAGTTTG-CGGCGGAACATTGGATGAAGGGGACA 9838
|||||||||||||||||||||| ||||| | | | | |||| | | || || |||
Sbjct 194205 CGCCCACACCAACAAACATCTCAACAAACTCGGACCCAGAAACAGAGTA-AAATGGAACA 194147
Query 9839 TTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCG 9898
| ||||| ||| | || || | | ||||||||| || |||||| || |
Sbjct 194146 CCTGCCTCACCAGCAGTAGCCTTTGCTATCAAAGTCTTACCTGTTCCTGGCGGGCCAGAT 194087
Query 9899 AGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928
| | ||||||| ||||||||| || |||
Sbjct 194086 AATATTGCACCTCTTGGAATCTTCGCACCA 194057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260734383160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |