Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 1e-11
>seq1
Length=1903380
Score = 84.2 bits (92), Expect = 1e-11
Identities = 169/246 (69%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 65024 CGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCA--- 65080
|||||||| | | | | | ||| ||||||| ||| ||| || | ||||| |||
Sbjct 597698 CGAGTTATCTCACTTATATCAGTGAAAATATACCTTGCGGCTGAGAAGTCTTTACCACCA 597757
Query 65081 GTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATA 65140
| || || ||||| |||| ||||| | || | ||||||||||| || ||||||
Sbjct 597758 GCAGCTCTAGTACCAAATGCACCAATTGGCTTCAAGATGTTAATATTGTTGGACCCAATA 597817
Query 65141 AAATTCTGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCC 65199
|||| ||||||| || || | | ||| | | || ||| ||||| |||||||||||
Sbjct 597818 AAATCTTGAGCCAAACCTATTACGGTCTG-AATCAATGACGCCTCACCATGATGATATCC 597876
Query 65200 TGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAA-ATTCT 65258
| || || |||| || ||| | ||| | ||||||||||| | | | || ||||
Sbjct 597877 GGTGTGCTCTGAGATGTAACCAACTAGTTGTGATACTTTTATTTCAGATTTCAACTTTCT 597936
Query 65259 TTTTAA 65264
||| ||
Sbjct 597937 TTTGAA 597942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679974148850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |