Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 1e-11 >seq1 Length=1903380 Score = 84.2 bits (92), Expect = 1e-11 Identities = 169/246 (69%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 65024 CGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCA--- 65080 |||||||| | | | | | ||| ||||||| ||| ||| || | ||||| ||| Sbjct 597698 CGAGTTATCTCACTTATATCAGTGAAAATATACCTTGCGGCTGAGAAGTCTTTACCACCA 597757 Query 65081 GTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATA 65140 | || || ||||| |||| ||||| | || | ||||||||||| || |||||| Sbjct 597758 GCAGCTCTAGTACCAAATGCACCAATTGGCTTCAAGATGTTAATATTGTTGGACCCAATA 597817 Query 65141 AAATTCTGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCC 65199 |||| ||||||| || || | | ||| | | || ||| ||||| ||||||||||| Sbjct 597818 AAATCTTGAGCCAAACCTATTACGGTCTG-AATCAATGACGCCTCACCATGATGATATCC 597876 Query 65200 TGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAA-ATTCT 65258 | || || |||| || ||| | ||| | ||||||||||| | | | || |||| Sbjct 597877 GGTGTGCTCTGAGATGTAACCAACTAGTTGTGATACTTTTATTTCAGATTTCAACTTTCT 597936 Query 65259 TTTTAA 65264 ||| || Sbjct 597937 TTTGAA 597942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679974148850