Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 105 7e-18 >seq3 Length=1410883 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || ||||||||||| | || ||| | | || |||||| || || | ||| | | Sbjct 803133 ACCGTGTGGGAGATATCCCAAAAGCATATCATCGACATGGCAGCCGACAGATCTGCTTTC 803192 Query 55805 ATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGC 55864 |||||||| || ||||| || ||||| ||| | | ||| | ||| |||||||| | Sbjct 803193 ATCGACCAATCACAGTCGCTCAACATTCACATCAAAGACCCTACCATGGGCAAGTTGACC 803252 Query 55865 TCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || ||||| ||||||||||| | ||||| ||||||||||| || | ||| Sbjct 803253 TCGATGCATTTCTACGGTTGGAAGAAGGGGTTGAAGACCGGTATGTACTACTTGAGAACC 803312 Query 55925 C 55925 | Sbjct 803313 C 803313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || ||| | ||||||||||||| |||||||| || || || | ||| || Sbjct 929153 GCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCT 929094 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | || | |||||||||||| ||||| | || |||||||||||||| || Sbjct 929093 GGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATA 929034 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATC 74917 || || ||| || || || ||||| |||| |||| |||||| Sbjct 929033 CCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATC 928987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215938438200