Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 134 3e-26 seq3 131 4e-25 >seq8 Length=1028784 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | || | ||| || || ||||||||||| || || | | ||| ||||| Sbjct 325705 TCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTTCC 325646 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| || || || ||||| || | | ||| ||||| ||||||| |||||||| Sbjct 325645 GTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 325586 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || |||||||| || ||||| ||||||||||||||| ||| ||||| | || || Sbjct 325585 ATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAAT 325526 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || | |||||| || || | |||||| Sbjct 325525 AGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATT 325489 >seq3 Length=1410883 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| |||||||||||||| || | | ||| || |||||||||| ||| || || Sbjct 317586 GTAGACTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGTTTACCA 317645 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | | ||| || ||||| |||| ||||||||||| || || ||| || Sbjct 317646 GCGAAGATTAATCTTTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGACTTG 317705 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || || || ||||||||| ||| ||||| | || || ||||| || || | |||| Sbjct 317706 ACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAGGTAATAGTCTTACCTGTTAAAGTC 317765 Query 211098 TTTACAAACACCTGCATTTT 211117 || || || | ||||| || Sbjct 317766 TTAACGAAAATTTGCATGTT 317785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151866335285