Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 4e-19
seq8 96.9 2e-15
>seq3
Length=1410883
Score = 109 bits (120), Expect = 4e-19
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 23605 CTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664
|| || ||||| ||||||||||| || | || || || || || || | || || ||
Sbjct 317788 CTGAACATGCAAATTTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTAGAGGTCGAA 317729
Query 23665 TCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723
||| | |||||| |||| ||| | || | ||||||| ||||| |||||| | || ||
Sbjct 317728 TCCTCTGACACTATTGACAATGTCAAGTC-AAAAATTCAAGACAAGGAAGGTATTCCACC 317670
Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783
||||| || | ||||| || || || ||||| ||||||| | | || || ||
Sbjct 317669 TGATCAGCAAAGATTAATCTTCGCTGGTAAACAGTTGGAAGATGGCAGAACCTTGTCTGA 317610
Query 23784 TTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| ||||| ||||| || || ||||| || || || ||| |||| ||
Sbjct 317609 CTATAACATCCAAAAGGAGTCTACCTTGCATTTGGTCTTGAGATTGAGAGGTGG 317556
>seq8
Length=1028784
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || |||||||| || | || || || || || || | || || || ||| |
Sbjct 325489 AATGCAAATCTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTGGAGGTCGAATCCTC 325548
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || | | || || || || || |||||| | || ||||| ||
Sbjct 325549 TGACACCATCGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATTCCTCCAGACCA 325608
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | || || || || || |||||| ||||||||| | | || || ||| |||||
Sbjct 325609 GCAAAGATTGATTTTCGCTGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTACAA 325668
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| || || || ||||||||||| || || ||| |||| ||
Sbjct 325669 CATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTGAGAGGTGG 325716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009562924572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |