Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq3 262 3e-65
>seq3
Length=1410883
Score = 262 bits (290), Expect = 3e-65
Identities = 581/859 (68%), Gaps = 28/859 (3%)
Strand=Plus/Minus
Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331
|||| |||||| || || || ||||| || | || || || |||||||| ||||||||
Sbjct 929432 ACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTTTCCATGAAATCAAAA 929373
Query 4332 GGATTAGTTGCGTTGTAATGTTTTTC---ACACTTTAGAGCTACAAGCAATCGGTCAGCT 4388
||||| || | ||||| ||||| || | | ||| || | |||| || ||
Sbjct 929372 GGATTTGTAACATTGTACACCTTTTCGTTACCC---AAAGCAACTAATAATCTATCTGCA 929316
Query 4389 ACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGC 4448
|||||||| | ||| || | ||| | || || || || | || |||||||
Sbjct 929315 ACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAACAAAGAGACAGGTAAT 929256
Query 4449 GCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTA 4508
|| | || ||||| || | ||| || || |||||||| ||||| || | | |
Sbjct 929255 GCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATAATCCTCTCAACAATT 929196
Query 4509 TCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAA 4568
||| | |||| | ||| || | |||||||| || ||||| ||| ||| |||
Sbjct 929195 TCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAAGCAAAGTCAGTATGTAAA 929136
Query 4569 CCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTT 4628
||||| ||||||| ||||| ||||||||| || || | || ||||| | |||||||||
Sbjct 929135 CCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGGCATCATACCTCTCTTC 929076
Query 4629 TTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAAC 4688
|| | ||| || |||| |||||||| ||| ||||| || || || || || || ||
Sbjct 929075 TTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATACCCTCAACAGCAGCGAAA 929016
Query 4689 GCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTA 4748
|| || | || ||||| | ||| || || |||||| | || ||||||| |
Sbjct 929015 GCAACAAGACGTTCACCGAATAATGCATCTTCATCGTTGATCCATCTCAAAGCCCAGTCA 928956
Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT---TTA-CTTTTTTC 4804
|| || ||||| | || ||||| ||| || || ||||| || | | | | |||
Sbjct 928955 GCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACAAAAAGTCAGCCTCTTT- 928897
Query 4805 AAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTC 4864
||| || | ||||| || || || | || || |||| || || ||||| ||
Sbjct 928896 ---TGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCTGAGTGGATATTCTC 928840
Query 4865 TATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC-GTTACAAA 4923
|| || |||||||| ||||||||| | ||||||| ||||||||||| | | ||
Sbjct 928839 CATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAACTTCAGCTGAGAA 928780
Query 4924 ATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA--C 4981
|| | || || ||||| ||||| || ||||| ||| || ||||| || || || | |
Sbjct 928779 AT-TCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAGAAAGCTAAGATTC 928721
Query 4982 ATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTT--TTCCAGTGGGGCAAATCT 5036
||| || ||| || ||| |||| |||| || | ||||||| |||| ||
Sbjct 928720 TTGAAATGAAAA--ACCTTTCATTGTCA--TTTAACTTGTCCTTCCAGTCATGCAAGTCC 928665
Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGAC 5096
||| || |||| ||| ||| |||||||||| || || || |||||||||||||| |
Sbjct 928664 TTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCCTCAGCTTTTTTGTACATTTGC 928605
Query 5097 CAAATATCAGGATA-CTGA 5114
|| || || |||| ||||
Sbjct 928604 CAGATTTCGTGATATCTGA 928586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049553157997
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |