Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3 315 1e-80
>seq3
Length=1410883
Score = 315 bits (348), Expect = 1e-80
Identities = 1188/1843 (64%), Gaps = 43/1843 (2%)
Strand=Plus/Minus
Query 76821 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTG 76880
||||||||||| || || | ||| |||| |||||||||||||| |||| |||
Sbjct 803302 TAGTACATACCGGTCTTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTTG 803243
Query 76881 GAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCT 76940
|||| || || ||||| || | |||||| ||| ||||||||||| |
Sbjct 803242 CCCATGGTAGGGTCTTTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGAT 803183
Query 76941 CTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACT 77000
|| || || ||||| | || || |||||| | || ||||| | |||||| | | |
Sbjct 803182 CTGTCGGCTGCCATGTCGATGATATGCTTTTGGGATATCTCCCACACGGTTTTGTACAAT 803123
Query 77001 TGTTTGATATCATCTGGAAGGTTTGTATT---TTGAATGGAACCACCATCTGATATAATT 77057
||||||| |||||||||| ||| | ||| || ||||| || ||| || ||
Sbjct 803122 TGTTTGAGCTCATCTGGAATGTTGGGCAACGATTGGATCGAACCGTTATTTGAAATGATA 803063
Query 77058 GTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCT--AAGGAGATGAG 77115
|||| || |||| || ||||| || || || ||| || || || | |
Sbjct 803062 TTATTTTTCATATTGTCGTTCCA-AAGACCCAAATTGACCAAATCCTTCAACAAG-TATG 803005
Query 77116 GATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATG 77175
| || |||||||| || || |||| ||||||||| | | ||| || || || ||||
Sbjct 803004 GGTTGACTATTTGGAACTCACCAGCCAATACTCTTCTCGAGTAGATGTTCGAAGTGTATG 802945
Query 77176 GTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCA 77235
| || | |||| ||||| || |||||||| | || || ||||| |||||||| || |
Sbjct 802944 GCTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGAGCAA 802885
Query 77236 CCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAA-TCC 77294
| | || ||||| | |||||| || || || | || | || | ||| | |||
Sbjct 802884 CAAGCAATGAGTTTCTCAAACCATGCTTTGCCATGTTTTGCTTCA-ATGTGTCCCAGTCC 802826
Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354
|| | || | ||| ||||| | || || || | | || || ||
Sbjct 802825 CACAATTCGGTAGGCTTTCTGTCCCACAAGTCATACTGCAAGAGACCCTTCGATGCTGGG 802766
Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414
|| || | || || || || | ||||| ||| || | ||| || ||||
Sbjct 802765 GAGCCTTCGTAGGTCTCGTATGTCCCTTCGACTTCTGCCAACTCAATGGATGCCTCCACA 802706
Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474
|| || | || ||||| || || || | | || | || ||||| | |||
Sbjct 802705 GCACCATGGTAGATTGTCTCAAAGATTTGAATGTTCAATTCCCTGGCTTCTTGAGAATCG 802646
Query 77475 AACGGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533
|| || || | |||| || |||||||| |||| || || || || | | |||| ||
Sbjct 802645 AATGGC-AACCTCAAAGCCATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGG 802587
Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593
||| |||||| | || || | || |||||||||| |||||||||||| ||| || ||
Sbjct 802586 TCTGTGTCTCATGTTAGATCTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGAT 802527
Query 77594 TTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATC- 77652
| | || | || | | || ||||| | || | ||||| ||||| | | |
Sbjct 802526 TCTGTTCAAGTTACGAGTGACGGCTTTACTTATATCGTGAAGTTTTTCAAAATTATACCA 802467
Query 77653 --------TTCCATCTATA---ACAAA--CATGTTCAAAGCTATAGATGCTAGATTACAA 77699
| |||| | ||||| || | ||| | ||||||||| | |||||
Sbjct 802466 GGTTGAAGTAGCATCACTCTCGACAAATGCAGG--CAAGGATATAGATGCCAAGTTACAT 802409
Query 77700 ACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTG 77759
|| || ||||||| | | |||| | |||||| ||| | ||| ||||
Sbjct 802408 ACAGCAACCTCATCTGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTA 802349
Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAAC 77819
||| | |||| ||| | |||||| |||| || || |||| || |||||||| || ||
Sbjct 802348 ATAATACCCAAATTCTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAAT 802289
Query 77820 GGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTA 77877
||||| || || || | || | || | |||| | ||| | ||| || ||| || |
Sbjct 802288 GGAGTACCTGTCTCTGTTTGAGCCTCTAAGATAGCATACCATA--ACTTCTGAGCCTTGA 802231
Query 77878 TCATAGATTTGTAT----CGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCA 77933
| | ||| | || | |||||||| |||| || | | ||| || |||
Sbjct 802230 C----GGTCTGTCTTCCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCA 802175
Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993
|| || | ||| |||| || || |||||| ||| | | ||| | ||| || |
Sbjct 802174 TCGCCGAATTTGTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTA 802115
Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053
| || || |||| |||||| || | |||||| ||||| | ||| ||||| |||| |
Sbjct 802114 TTTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTG 802055
Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113
| ||| | |||||| || || |||||| ||| || | || || | |||||| | |
Sbjct 802054 GCTCTGTTTTCTTCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCA 801995
Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173
||||||||||| | || | || | | ||||||| ||| || || || ||||| |
Sbjct 801994 TGCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACG 801935
Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233
|| | || ||||| ||| | || | | ||| |||||||||||||| || || || ||
Sbjct 801934 TAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTG 801875
Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCT 78293
||||| | ||| || || ||| ||||||||| ||| | || || || ||
Sbjct 801874 GTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCA 801815
Query 78294 GCCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTC 78352
|| |||| || || | ||| | |||| ||||| || || |||||||| || || |||
Sbjct 801814 GCACTCTTGGAAATCAAAGCAC-ACGTCTTCAACGTGTCATAGATACCGTCGATGGAGTC 801756
Query 78353 ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAA 78412
||| ||||| || | || || ||||||||| | || || || ||||| ||
Sbjct 801755 TTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAA 801696
Query 78413 TAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAG 78471
|| || || || ||||| || || || ||| ||| | ||| |||||| || ||||||
Sbjct 801695 CAAGGTTGGGGAAGCATGTGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAA 801637
Query 78472 CTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTC 78531
| | || || | |||||| || | || || | ||| | || || |||||||
Sbjct 801636 CCCGTGGGATATCATCTCTATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTC 801577
Query 78532 TTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 78591
| || | |||| | | ||||| ||||| ||| | || || || || ||||| |
Sbjct 801576 TCTCGGCAACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGA 801517
Query 78592 AATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATT 78634
| |||||||| ||||| | ||| ||| |||| |||| ||
Sbjct 801516 AGTAGTTGTAGTTGAAGTCGCGATCGAAAACAATAGCAGAGTT 801474
Score = 226 bits (250), Expect = 4e-54
Identities = 589/893 (66%), Gaps = 10/893 (1%)
Strand=Plus/Minus
Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896
||| ||||| |||||||| |||| || | || || ||||| || ||||| || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956
||| || || |||||||| |||||||| ||||| |||| || | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016
|| | | | |||||||||||| ||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076
||| || | | || |||| || || || | ||| || | ||| || || || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACAT 48136
|| || ||| || |||| || |||| | |||||| ||||
Sbjct 929220 TTCGGTGATAATCCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAA 929161
Query 48137 TAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 48196
||| || ||||| ||| ||| | |||||||||||| | ||| ||||||||||| |||||
Sbjct 929160 TAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGT 929101
Query 48197 GAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA 48256
||||| ||||| | || | || || | ||| || || | || || || ||| ||
Sbjct 929100 AAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAA 929041
Query 48257 GAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA-ACTG--GCTTCGTT 48313
||| || || || || || || || || ||| | || ||| | | || |||| |
Sbjct 929040 GAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCATC 928981
Query 48314 GTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373
|| ||||| | ||||| |||||||||||||| | ||| || || | || || ||
Sbjct 928980 GTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGC 928921
Query 48374 ATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
|||||| | ||||| || || ||| || | || ||||| || || | | ||
Sbjct 928920 ATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAGTA 928861
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
|||| ||||| ||||| || || || |||||||| ||||| ||| | |||||||
Sbjct 928860 GGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGG 928801
Query 48494 GATCTGTACCTC--CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTA 48551
| || || || | | ||| || ||| |||| ||||| || || || ||||||
Sbjct 928800 AACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCAGAT 928743
Query 48552 GCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTT---A 48608
|||||||| || ||||| | | ||| ||| | |||| ||| | | | ||
Sbjct 928742 GCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTGTCC 928683
Query 48609 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCT 48668
|||||||||| | || || | || | ||| ||||| ||||||||||| |||||
Sbjct 928682 TTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCCTCA 928623
Query 48669 GCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|||||||| ||||| | ||| || || ||| |||||| || | ||||||
Sbjct 928622 GCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668721849760
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