Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq8 111 4e-19
seq3 111 4e-19
>seq8
Length=1028784
Score = 111 bits (122), Expect = 4e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || ||||| |||||||| || | ||| ||||| || |||||||
Sbjct 325921 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAATGTTCTGCCGTCTTCTAATTG 325862
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| |||||||| || | || || ||||| | | ||| |||||||| |||||||||||
Sbjct 325861 TTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGAATTTT 325802
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||||| | || | |||| ||| ||| || || | ||||| || || || ||
Sbjct 325801 ACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGACCTCTAAGGTAATGGTCTTACCAGT 325742
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
| |||||| ||||||| |||||
Sbjct 325741 CAAAGTCTTGACGAAGATTTGCAT 325718
Score = 107 bits (118), Expect = 4e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | |||||| || |||||||||||||| |||| || ||||| ||
Sbjct 325705 TCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTTCC 325646
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | ||| || ||||| || | || |||||||| | | || ||||||||
Sbjct 325645 GTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 325586
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || ||||| | || | | |||| || || || || | |||||
Sbjct 325585 ATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAAT 325526
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
||| || || || | |||||| ||||||| ||||||
Sbjct 325525 AGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATT 325489
Score = 107 bits (118), Expect = 4e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || ||||| || ||||| || | || ||||| || ||||| |
Sbjct 326605 ATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGACAATGTTCTACCGTCTTCCAATTG 326546
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || ||||| || | ||| |||||||| | | || |||||||| ||||| || ||
Sbjct 326545 TTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTT 326486
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | |||| || ||| ||||| | |||||||||||| || ||
Sbjct 326485 ACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTAATAGTTTTTCCAGT 326426
Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104
| |||||| ||||||| |||||
Sbjct 326425 CAAAGTCTTGACGAAGATTTGCAT 326402
>seq3
Length=1410883
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | |||||||| ||||||||||| || || | || ||||| ||
Sbjct 317567 TCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 317626
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | ||| || |||||||| | || ||||| || | | || ||||||||
Sbjct 317627 ATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGGAATACCTTCCTT 317686
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||||||| |||||| | || | |||| || || || || | |||||
Sbjct 317687 GTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAGGTAAT 317746
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || || || | |||||| ||||| | ||||| ||
Sbjct 317747 AGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCATGTT 317785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820666950039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |