Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq8 156 9e-33
seq3 147 5e-30
>seq8
Length=1028784
Score = 156 bits (172), Expect = 9e-33
Identities = 162/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| |||||| ||| ||| ||||| ||||||||||| | |||| || | || || ||
Sbjct 326382 ACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTTCCGTCTTC 326324
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| |||||| ||||||||||| || | ||||||||| || ||||| ||||| |||||
Sbjct 326323 CAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTG 326264
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|||||| || ||| | |||||||| || |||| || ||||| | |||||| || ||
Sbjct 326263 GATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACTTCCAAAGTGATTGTTTT 326204
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| || |||||
Sbjct 326203 TCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 150 bits (166), Expect = 4e-31
Identities = 161/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||| ||||||||||||| | || | ||| || |||
Sbjct 325926 ACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAATGTTCTGCCGTCTTCT 325867
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| ||||| || || || | ||||||||| || ||||| ||||| |||||
Sbjct 325866 AATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGA 325807
Query 283011 ATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| ||| || || ||| | ||||| ||||| |||| ||||| || | || || |||||
Sbjct 325806 AT-TTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGACCTCTAAGGTAATGGTCTT 325748
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||||||||| ||||| || |||||
Sbjct 325747 ACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Score = 143 bits (158), Expect = 6e-29
Identities = 157/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| || ||| ||||||||||||||||| | |||| || | || || || | ||
Sbjct 325693 ATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTTCCGTCTTCCAATT 325635
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
|||| || || || ||||| | ||| ||||| |||||||| ||||| ||||||||||
Sbjct 325634 GTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTATCTTGGATCT 325575
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
| || ||| | ||||| ||||| || | |||||| || | || || |||||||| |
Sbjct 325574 TACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATAGTCTTACCTG 325515
Query 283075 TCAAAGTCTTAACGAATATCTGCATT 283100
| |||||||||||||| || ||||||
Sbjct 325514 TTAAAGTCTTAACGAAGATTTGCATT 325489
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| || ||| ||||| ||||||||||| | | || | ||| || |||
Sbjct 326154 ACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGATAATGTTCTGCCGTCTTCT 326095
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || || || ||||| | ||||||||| || ||||| ||||| ||||||
Sbjct 326094 AATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGG 326035
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| || ||| | || |||||||| || | || ||||| | |||||| || ||
Sbjct 326034 ATCTTACTCTTGACGTTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTGATTGTTTTT 325975
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| || |||||
Sbjct 325974 CCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 125 bits (138), Expect = 1e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||| || |||||||| | | || | || || ||
Sbjct 326610 ACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGACAATGTTCTACCGTCTTCC 326551
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || || || ||||| | ||| ||||| |||||||| ||||| ||||||
Sbjct 326550 AATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGG 326491
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| || || | || |||||||| || | || ||||| | ||| || || ||
Sbjct 326490 ATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTAATAGTTTTT 326431
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| || |||||
Sbjct 326430 CCAGTCAAAGTCTTGACGAAGATTTGCAT 326402
>seq3
Length=1410883
Score = 147 bits (162), Expect = 5e-30
Identities = 163/215 (76%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| ||| || || || ||||||||||| ||||||| |||| || | |||||| ||
Sbjct 317574 ACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 317632
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||||| || || ||||| || | ||| || ||| |||||||| |||||||||||
Sbjct 317633 CAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGGAATACCTTCCTTGTCTTG 317692
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| |||| || || | || |||||||| || | |||||| || | || || |||||
Sbjct 317693 AATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAGGTAATAGTCTT 317752
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104
||| || |||||||||||||| || ||||| ||||
Sbjct 317753 ACCTGTTAAAGTCTTAACGAAAATTTGCATGTTCA 317787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739079297886
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |