Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3 260 1e-64 >seq3 Length=1410883 Score = 260 bits (288), Expect = 1e-64 Identities = 502/729 (69%), Gaps = 11/729 (2%) Strand=Plus/Minus Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 |||||||| || | || | |||| ||||| || || ||||| | || || || ||| Sbjct 929447 TTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTT 929388 Query 23278 TCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGAT--AATTCCTTTA 23335 ||||| |||||||| ||||| | | ||| || || |||| | | | || | || Sbjct 929387 TCCATGAAATCAAAAGGATTTGTAACATTGTACAC--CTTTTCGTTACCCAAAGCAACTA 929330 Query 23336 AAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAA-TCATAGTTTATACCTATT 23394 | | |||||||| |||||||| | ||||||||||||||| | || || ||||| | Sbjct 929329 ATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTA-TTCATACCCAAC 929271 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454 | || || | ||||| || ||| |||||||||| ||| || || | || Sbjct 929270 AAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATA 929211 Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCA 23514 || ||| || |||| || ||| | || |||| |||||||| || ||| Sbjct 929210 ATCCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAAGCA 929151 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 || ||| ||||| |||||||| || | ||||||||| ||||| ||||| | |||||| Sbjct 929150 AAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGGC 929091 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCC 23634 || | |||| || || | ||| || || | |||||||| || |||||||||||| Sbjct 929090 ATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATACCC 929031 Query 23635 TCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAt 23694 |||||||| || || || ||||||||| ||| ||| ||||| | ||| |||||| Sbjct 929030 TCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCATCGTTGATCCAT 928971 Query 23695 ttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGA 23754 | | ||| | ||||||| || | ||| ||| | |||||||| || || | | Sbjct 928970 CTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACA-A 928912 Query 23755 AAAGT-TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813 ||||| |||| ||| | ||||| |||||||| | |||| || |||| || Sbjct 928911 AAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCTGA 928852 Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAAC 23873 || ||||| || || || ||||| |||||||| ||| | ||||| | | |||||| Sbjct 928851 GTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAAC 928792 Query 23874 ATCA-TTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGA 23932 ||| | | |||| | | | | || || ||||| |||||||||||| |||||||||| Sbjct 928791 TTCAGCTGAGAAAT-TCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAGA 928733 Query 23933 AAGC-AAGA 23940 |||| |||| Sbjct 928732 AAGCTAAGA 928724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487941332600