Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09-
18] 6,048 sequences; 11,211,290 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 196 6e-45
seq2458 190 3e-43
seq5123 152 7e-32
>seq1348
Length=1357
Score = 196 bits (216), Expect = 6e-45
Identities = 588/899 (65%), Gaps = 13/899 (1%)
Strand=Plus/Plus
Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906
|||| |||||||| || |||||||| ||| || | |||||||| || ||||| |
Sbjct 136 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 194
Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966
|||| | || || || ||||||||||||||||| || || || || || ||| |
Sbjct 195 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 254
Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026
| || || | | || ||| || ||||| || || | ||| ||||| | |
Sbjct 255 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 314
Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 36084
|| ||||| |||| | |||||| | || | ||||| | |||| |||||||
Sbjct 315 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 372
Query 36085 AGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144
|| || || || | ||| | || | || ||| | | |||||
Sbjct 373 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 432
Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204
|||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||||
Sbjct 433 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 492
Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264
|||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| ||
Sbjct 493 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 552
Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC---- 36320
|| || || || | ||||| | | |||||||||| ||||| || ||| |||
Sbjct 553 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGG 611
Query 36321 CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380
|| || ||| || ||||| || |||||| |||||||||| | || || |
Sbjct 612 CGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 671
Query 36381 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 36440
| | || ||||| || | | | |||| ||| || || | || ||||| ||||
Sbjct 672 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 731
Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500
| | || |||| || ||||| |||||||| ||||| || ||||||||||
Sbjct 732 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 791
Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560
| ||||| | ||| || ||||| || | || ||| | || |||||||| || || |
Sbjct 792 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 851
Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--G 36617
||||| || || ||||| || | || || ||| || | ||||| | ||
Sbjct 852 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 911
Query 36618 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || |
Sbjct 912 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 971
Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736
| || || || || || | |||||| ||||| || | || || |||| ||||
Sbjct 972 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 1030
>seq2458
Length=2360
Score = 190 bits (210), Expect = 3e-43
Identities = 714/1104 (65%), Gaps = 38/1104 (3%)
Strand=Plus/Minus
Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 1288 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 1229
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||||||||||||||||||||| |||||||| | | || |
Sbjct 1228 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 1169
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
|| | ||||| ||| ||| |||||| || || | | || || ||||| |
Sbjct 1168 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 1109
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072
| ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| |
Sbjct 1108 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 1050
Query 65073 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 65126
|||| ||||| || | |||||||| ||| | || ||||| || || | ||
Sbjct 1049 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 993
Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186
| |||| ||| | | || || | | || | | || || || || ||
Sbjct 992 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 933
Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246
||||| || || || || | || | ||| ||||| || ||||| | | | |||
Sbjct 932 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 873
Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306
|||| ||||| ||||| | || |||||||| ||||| ||||||| || ||||
Sbjct 872 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 813
Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 65363
|||| ||| ||| | | || |||||||| |||| ||||||| ||| | | |
Sbjct 812 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 756
Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423
||| ||||| ||||| | | || |||||| |
Sbjct 755 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 696
Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483
|| |||||||| || ||||||| ||||||||||||| || || | | | | ||||
Sbjct 695 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 636
Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543
|| ||||| ||||| | ||||||| | |||||| ||||||||| || |
Sbjct 635 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 576
Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603
|| || || || | ||| || | ||||||||||| | | | || |||||||||||| ||
Sbjct 575 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 516
Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663
|| || || |||||| || ||| || |||||| ||| || | | | || | |||
Sbjct 515 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 456
Query 65664 C---TGACAATT-----ACTTTGACCACATCCTT--CAGTT---TGAGAAAATCAAATC- 65709
| | |||| | | ||| | || || |||| || | || || | |
Sbjct 455 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 396
Query 65710 -GCTCATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACC 65765
|||| || ||| ||| | || ||||| || |||| |||||||| ||
Sbjct 395 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 336
Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 65824
|||| | | | | |||| | || ||| ||| ||| || | |||||||| ||
Sbjct 335 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGAT-GACTTGATGACACC 277
Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884
||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||
Sbjct 276 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 217
Query 65885 AGTTTCAATCTGAGATTCTATAAT 65908
||||||| | |||| ||| | |||
Sbjct 216 AGTTTCAGTTTGAGCTTCCAAAAT 193
>seq5123
Length=1068
Score = 152 bits (168), Expect = 7e-32
Identities = 407/617 (66%), Gaps = 4/617 (1%)
Strand=Plus/Plus
Query 66260 CATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACG 66319
||| ||||| | ||| || || ||||| || || || | || || ||| ||| |||
Sbjct 12 CATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACG 71
Query 66320 AATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 66379
||| ||| || |||||| || || || || |||| || || || || ||| ||
Sbjct 72 AATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTT 131
Query 66380 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 66439
|| || || || || ||||| ||| || ||| ||||| || | ||||| ||
Sbjct 132 CAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGA 191
Query 66440 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 66499
|||||| | ||| || ||||| || || || ||||| ||||| ||||| ||||
Sbjct 192 CATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTT 251
Query 66500 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 66559
| ||| | | || ||||| || | ||| | || ||||| | || || ||||
Sbjct 252 TAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAG 311
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTATTTTCAACA 66618
|||||| | ||| | | || || || | ||| | | |||| ||| ||| | | |
Sbjct 312 TGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGACCGTTGATTCTTAGTA 370
Query 66619 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAA 66677
| || || |||||||||||||||||||||||| |||| |||||| |||| || ||
Sbjct 371 AATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-TCTCTGTCATAG 429
Query 66678 ATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAA 66737
| ||| | ||||| | ||||||||| | || | || | || | | | ||
Sbjct 430 ACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTGTAGACATCATCAGAG 489
Query 66738 ATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACT 66797
|| || |||| | || ||| | || |||||| || | | | ||| || | ||
Sbjct 490 ATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAAAGATCTTCGACAACC 549
Query 66798 TCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATA 66857
| | |||| ||||| | |||| ||| |||| ||| || | ||| ||||| || ||||
Sbjct 550 TTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTCTGGCCGCTAGG 609
Query 66858 ATGGCATAATCCGGATG 66874
|||| ||||| |||||
Sbjct 610 GTGGCGTAATCTGGATG 626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658123042136320
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