Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1348 187 3e-42 seq2458 181 1e-40 seq3714 156 5e-33 seq5123 152 7e-32 >seq1348 Length=1357 Score = 187 bits (206), Expect = 3e-42 Identities = 585/898 (65%), Gaps = 11/898 (1%) Strand=Plus/Plus Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 136 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 194 Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469 |||| | || || || ||||||||||||||||| || || || || || ||| | Sbjct 195 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 254 Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529 | || || | | || ||| || ||||| || || | ||| ||||| | | Sbjct 255 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 314 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 32587 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 315 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 372 Query 32588 AGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATG 32647 || || || || | ||| | || | || ||| | | ||||| Sbjct 373 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 432 Query 32648 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 32707 |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||||| Sbjct 433 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 492 Query 32708 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 32767 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 493 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 552 Query 32768 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 32827 || || || || | ||||| | | |||||||||| ||||| || ||| | ||| Sbjct 553 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 612 Query 32828 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 32884 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 613 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 672 Query 32885 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 32944 | || ||||| || | | | |||| ||| || || | || ||||| ||||| Sbjct 673 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 732 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 | || |||| || ||||| |||||||| ||||| || |||||||| | | Sbjct 733 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 792 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33064 ||||| | ||| || ||||| || | || ||| | || |||||||| || || || Sbjct 793 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 852 Query 33065 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 33121 |||| || || ||||| || | || || ||| || | ||| ||| || | Sbjct 853 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 912 Query 33122 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 913 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 972 Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 33239 || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 973 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 1030 >seq2458 Length=2360 Score = 181 bits (200), Expect = 1e-40 Identities = 712/1104 (64%), Gaps = 38/1104 (3%) Strand=Plus/Minus Query 61846 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 1288 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 1229 Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 61964 | | || |||||||||||||||||||||| |||||||| | | || | Sbjct 1228 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 1169 Query 61965 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62024 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 1168 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 1109 Query 62025 TTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62083 | || || |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 1108 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 1050 Query 62084 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 62137 |||| ||||| || | |||||||| ||| | || ||||| || || | || Sbjct 1049 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 993 Query 62138 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62197 | |||| ||| | | || || | | || | | || || || || || Sbjct 992 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 933 Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 ||||| || || || || | || | ||| ||||| || ||||| | | | ||| Sbjct 932 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 873 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 |||| ||||| ||||| | || |||||||| ||||| ||||||| || |||| Sbjct 872 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 813 Query 62318 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 62374 |||| ||| ||| | | || |||||||| |||| ||||||| ||| | | | Sbjct 812 CTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 756 Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62434 ||| ||||| ||||| | | || |||||| | Sbjct 755 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 696 Query 62435 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62494 || |||||||| || ||||||| ||||||||||||| || || | | | | |||| Sbjct 695 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 636 Query 62495 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT 62554 || ||||| ||||| | ||||||| | |||||| ||||||||| || | Sbjct 635 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 576 Query 62555 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62614 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 575 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 516 Query 62615 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62674 || || || |||||| || ||| || |||||| ||| || | | | || | ||| Sbjct 515 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 456 Query 62675 C---TGACAATT-----ACTTTGACCACATCCTT--CAGTT---TGAGAAAATCAAATC- 62720 | | |||| | | ||| | || || |||| || | || || | | Sbjct 455 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 396 Query 62721 -GCCCATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACC 62776 | || || ||| ||| | || ||||| || |||| |||||||| || Sbjct 395 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 336 Query 62777 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 62835 |||| | | | | |||| | || ||| ||| ||| || | |||||||| || Sbjct 335 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGAT-GACTTGATGACACC 277 Query 62836 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 62895 ||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||||| Sbjct 276 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 217 Query 62896 AGTTTCAATCTGAGATTCTATAAT 62919 ||||||| | |||| ||| | ||| Sbjct 216 AGTTTCAGTTTGAGCTTCCAAAAT 193 >seq3714 Length=1178 Score = 156 bits (172), Expect = 5e-33 Identities = 453/687 (66%), Gaps = 18/687 (3%) Strand=Plus/Minus Query 63271 CATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACG 63330 ||| ||||| | || || || ||||| ||||| || | |||||| || ||| ||| Sbjct 1167 CATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACG 1108 Query 63331 AATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63389 || || | || ||| ||||| | || ||||| |||| || || | || ||| || Sbjct 1107 GATGTTGTTGATATGA-AGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTT 1049 Query 63390 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 63449 | || |||||||| || || || ||| |||||| ||||| || || ||||| || Sbjct 1048 TCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAG 989 Query 63450 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATT 63509 ||||||| || | || || || || ||||| || || ||||||||||| || || Sbjct 988 ACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATC 929 Query 63510 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63569 || || | | ||| || |||| | | || || ||||| | ||| || |||| Sbjct 928 TTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTA 869 Query 63570 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63629 || |||||||||| || |||||||| | ||| | | | ||| | | | | || Sbjct 868 GCGCCACACGCATTACCAAATGCTGAGGACGTTCTGCCACTTCACCGTTCAGTCTTAGCA 809 Query 63630 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAA 63688 |||| || |||| || || || || ||||| | || || ||| || | ||||| Sbjct 808 AGTACGAACGCTCCAGTGTCTTGAATCCGAAATACGTATACTGGAAA-TCCCTATCGTAC 750 Query 63689 ATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG--GTAA--TACT 63744 | || ||||||| | |||| |||||| | | | ||| |||| | | Sbjct 749 ACGATGGCCGAGTTCAAAGTATC------TTTGTTTTCCATGACAATGTTGTAAATTTCG 696 Query 63745 T--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCC 63802 | ||||| |||||| ||| || ||| | || || | ||| | ||||||||| Sbjct 695 TCCGAAATCATAGGAGCATGCTTTCCAGTAGCTGGGTTAATCCAGTCGTGTAAATCCTCA 636 Query 63803 ATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCG 63862 || |||| ||| | ||| | |||| || |||| || || | ||| ||||||||| Sbjct 635 ATAACTTTGGAGAATTGCTTTGTGGTTTGCTTATGTAAGTTAGAGATGGCGATTCTAGCG 576 Query 63863 GCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAG 63921 |||||| |||||||||| || || || || || || || | |||| ||||| || Sbjct 575 GCTAGAGTGGCATAATCAGGGTGCACAGTGGT-CATGTATGCACATGTTTCAGCTGCAAG 517 Query 63922 AGTGTCCAATTCTACCGTTGTTACACC 63948 | |||||| || || || || ||||| Sbjct 516 ATTGTCCAGCTCAACGGTAGTAACACC 490 >seq5123 Length=1068 Score = 152 bits (168), Expect = 7e-32 Identities = 407/617 (66%), Gaps = 4/617 (1%) Strand=Plus/Plus Query 63271 CATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACG 63330 ||| ||||| | ||| || || ||||| || || || | || || ||| | | ||| Sbjct 12 CATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACG 71 Query 63331 AATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 63390 ||| ||| || |||||| || || || || |||| || || || || ||| || Sbjct 72 AATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTT 131 Query 63391 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 63450 || || || || || ||||| ||| || ||| ||||| || | ||||| || Sbjct 132 CAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGA 191 Query 63451 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTT 63510 |||||| | ||| || ||||| || || || ||||| ||||||||||| |||| Sbjct 192 CATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTT 251 Query 63511 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63570 | ||| | | || ||||| || | ||| | || ||||| | || || |||| Sbjct 252 TAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAG 311 Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACA 63629 |||||| | ||| | | || || || | ||| | | |||| ||| ||| | | | Sbjct 312 TGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGACCGTTGATTCTTAGTA 370 Query 63630 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAA 63688 | || || |||||||||||||||||||||||| |||| |||||| |||| || || Sbjct 371 AATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-TCTCTGTCATAG 429 Query 63689 ATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAA 63748 | ||| | ||||| | ||||||||| | || | || | || | | | || Sbjct 430 ACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTGTAGACATCATCAGAG 489 Query 63749 ATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACT 63808 || || ||| | || ||| | || |||||| || | | | ||| || | || Sbjct 490 ATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAAAGATCTTCGACAACC 549 Query 63809 TCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGA 63868 | | |||| ||||| | |||| ||| |||| ||| || | ||| ||||| || ||||| Sbjct 550 TTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTCTGGCCGCTAGG 609 Query 63869 ATGGCATAATCCGGATG 63885 |||| ||||| ||||| Sbjct 610 GTGGCGTAATCTGGATG 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633584097420800