Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2458 152 6e-32 >seq2458 Length=2360 Score = 152 bits (168), Expect = 6e-32 Identities = 585/912 (64%), Gaps = 29/912 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 905 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 846 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 845 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 786 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 785 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 727 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 726 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 667 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 666 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 607 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 606 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 547 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 546 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 487 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 486 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 427 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 426 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 370 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 369 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 310 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 309 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 250 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 249 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 190 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 189 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 133 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 132 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 76 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 75 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 16 Query 116784 GAGCGCCGAGAA 116795 || || | ||| Sbjct 15 TAGAGCAGGGAA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613460818855680