Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2458 194 2e-44 seq5123 95.1 1e-14 >seq2458 Length=2360 Score = 194 bits (214), Expect = 2e-44 Identities = 443/661 (67%), Gaps = 28/661 (4%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 887 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 828 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 827 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 771 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 770 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 711 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | ||| | |||| ||| | |||||| || | Sbjct 710 GGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTT 653 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| ||| || ||||| || ||||||||||| | ||| | | |||||| || | Sbjct 652 CCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAG 593 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||||||| | || ||| || || || ||||||||||||||||||||| ||| Sbjct 592 AATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAA 533 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||| Sbjct 532 TTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 473 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 |||||| ||||| ||| ||||||| || | |||||||| | ||||| | | Sbjct 472 TGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGT 413 Query 106428 AAGTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| ||||| |||| ||| || | ||| | ||| | || | Sbjct 412 ATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAG 356 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| || |||||||| || ||||| | ||| ||| || | |||||| || |||| Sbjct 355 CCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGT 296 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || ||| || || || || ||||| ||| ||| |||| || |||||||||| Sbjct 295 TTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGT 236 Query 106593 A 106593 | Sbjct 235 A 235 >seq5123 Length=1068 Score = 95.1 bits (104), Expect = 1e-14 Identities = 172/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 |||||| || | |||||||| ||||| || || || ||||| ||| | | || Sbjct 78 ATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGT 137 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 107169 | || || || | ||| ||||||||||| |||| | | ||| ||| |||||| || Sbjct 138 GTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTG 197 Query 107170 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGG 107228 ||| |||| ||||| |||||||| | ||||| | |||||| | || ||| || | | Sbjct 198 AGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAG 256 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCA 107288 ||||| || || || || || ||| || || ||| ||||||||||| | || | Sbjct 257 ACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGA 316 Query 107289 CACGCATAA 107297 | | ||||| Sbjct 317 CTCTCATAA 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589936197451520