Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq658 329 3e-84 seq3536 291 7e-73 seq1477 208 6e-48 seq3689 190 2e-42 seq1329 118 9e-21 seq2438 111 1e-18 seq2192 96.9 3e-14 seq1653 96.9 3e-14 seq5323 89.7 4e-12 seq1581 87.8 1e-11 seq1345 87.8 1e-11 >seq658 Length=4110 Score = 329 bits (364), Expect = 3e-84 Identities = 602/870 (69%), Gaps = 14/870 (2%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 || ||| ||| || |||| ||||| | || || ||| ||||| || |||||| Sbjct 2878 GGTACTTTTGATGTCTCTCTGCTATCCATAGATGAAGGTGTCTTTGAGGTTAAGGCTACT 2819 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGT-GT 551845 ||| || |||| | ||||| |||||||| |||| ||| ||||| | | | | | Sbjct 2818 GCTGGTGACACTCACTTGGGTGGTGAAGATTTCGATAGTAGGCTGGT-TAACTTTCTAGC 2760 Query 551846 TGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTG-CCAAAGCTC--TTCG 551902 || || || ||| ||||||| ||| |||||| ||| || |||||| || | | Sbjct 2759 CGAGGAGTTCAAAAGAAAAAATAAAAAGGATCTA---ACAACTAACCAAAGGTCCCTAAG 2703 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 | |||| || || ||||| ||||| || |||| || || | |||| || | Sbjct 2702 GAGGTTAAGGACCGCCGCTGAAAGGGCCAAGAGAACTCTGTCTTCGTCTGCTCAGACATC 2643 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||| ||| ||||||||||||||||||| || |||| |||| | ||| | ||||| | Sbjct 2642 TATAGAAATAGATTCATTATTTGAGGGTATCGATTTCTATACTTCCATTACAAGGGCAAG 2583 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||||||||| | ||| ||||| | |||||| ||| | || ||||| ||| ||||||| Sbjct 2582 ATTTGAAGAATTATGTGCTGATTTGTTTAGATCTACATTGGAGCCAGTGGAAAAAGTTTT 2523 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 |||||||| | ||||| || || | |||||||||| ||||||||||| || || Sbjct 2522 GGCTGATTCAAAATTAGATAAGTCACAAATTGATGAAATTGTACTTGTTGGTGGTTCAAC 2463 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 ||||||||| ||| | | || || | | || ||||||||||||| || ||| Sbjct 2462 AAGAATTCCAAAAGTACAAAAACTGGTTTCTGATTTTTTCAATGGTAAAGAACCAAACCG 2403 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 |||| || |||||||| || || |||||||| || | || || || | |||| Sbjct 2402 TTCGATTAACCCTGATGAGGCCGTCGCTTATGGTGCTGCCGTACAGGCTGCCA-TCTTAA 2344 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTAC--TTG-TAGATGTTACTCCTCTATC 552319 || | | | | || || || ||| ||| ||| | |||||| | || |||| Sbjct 2343 CGGGTGACCAG-TCGTCGACGACCCAAGATT-TACTGTTGCTGGATGTTGCACCATTATC 2286 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 ||| ||| | ||||| | || ||||||||||| || | ||| |||||| | ||||| Sbjct 2285 TCTAGGTATTGAAACTGCAGGTGGTATTATGACAAAGTTGATCCCAAGAAATTCGACTAT 2226 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 || |||||||| || ||||| || || | || || ||| ||| ||| || Sbjct 2225 CCCAACAAAAAAATCGGAAGTGTTTTCCACCTACGCTGACAACCAACCTGGTGTGTTGAT 2166 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA 552499 ||| ||||||| || ||||| | | || ||||| || |||| ||| |||| ||| | Sbjct 2165 ACAAGTTTTTGAGGGTGAAAGGACAAGGACAAAAGACAACAATCTACTGGGTAAATTTGA 2106 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 || |||||||| || ||||| | || ||||| |||||||||||||| || ||||| Sbjct 2105 GTTGAGCGGTATTCCACCCGCTCCAAGAGGCGTACCACAAATTGAAGTTACATTTGATAT 2046 Query 552560 CGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||||| ||||| ||| |||| || |||| Sbjct 2045 CGATGCAAATGGTATTCTGAACGTATCTGC 2016 Score = 176 bits (194), Expect = 4e-38 Identities = 380/554 (69%), Gaps = 16/554 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG-TTTGGCAAAATGGTA 550049 |||| | ||||| |||||||| || || ||| ||||||| | ||| ||||| | || Sbjct 3470 AGCTGTTGGTATTGATTTAGGTACAACCTATTCATGTGTTGCTCATTTTGCAAAC-GATA 3412 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||||||||||| || || ||||||||||| ||||| || || |||||||| |||| | Sbjct 3411 GGGTTGAAATTATCGCTAACGATCAAGGTAATAGAACGACGCCTTCTTATGTGGCTTTTA 3352 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC- 550168 | || || ||| || ||||||| || || || ||||||| | | | | || || Sbjct 3351 CTGACACAGAAAGGCTAATTGGTGACGCTGCGAAGAATCAAGCTGC-GATGAACCCACAT 3293 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 ||||| | || |||||||| ||| | || ||| | | || ||||| | || | Sbjct 3292 AATACAGTATTCGATGCTAAGCGTCTGATCGGACGTAAATTCGATGATCCAGAAGTGACG 3233 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAA---ATTGTTAATGTTTCTGGAAAACCTTATATT 550285 ||| ||||||| || ||| || |||| || | || ||||| || | Sbjct 3232 AACGATGCTAAGCATTACCCATTCAAAGTGATTGACAAGGGA---GGTAAACCGG-TAGT 3177 Query 550286 G-AAGCTACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGG 550343 | ||| || |||| | ||| | |||| | |||||| ||||||| || ||| Sbjct 3176 GCAAGTGGAATATAAAGGCGA-GACAAAGACATTTACTCCAGAAGAAATTTCCTCAATGA 3118 Query 550344 TTTTAATGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 | || | || ||||| | || || || ||||| | || |||||| | ||||| Sbjct 3117 TCTTGACAAAGATGAAGGAGACTGCTGAGAACTTTT-TAGGAACAGAAGTGAAAGATGCT 3059 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 ||| |||| || ||||| ||||| || || |||||| | ||||| || |||||||| || Sbjct 3058 GTAGTAACGGTTCCAGCCTATTTCAACGATTCACAAAGGCAAGCAACAAAAGATGCCGGT 2999 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 || || || | || ||||||||||| || ||||||||||| ||||| || |||| Sbjct 2998 ACAATCGCGGGCTTGAACGTTCTTCGTATCATTAATGAACCTACAGCTGCCGCTATTGCG 2939 Query 550523 TATGGACTTGATAA 550536 ||||| || || || Sbjct 2938 TATGGGCTGGACAA 2925 >seq3536 Length=1355 Score = 291 bits (322), Expect = 7e-73 Identities = 482/688 (70%), Gaps = 12/688 (2%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 |||||||| |||||||| || |||| ||||| || |||||||| | || || Sbjct 1247 AGAACTGCGGCAGAAAGAGCTAAGAGAGCGCTTTCTTCCTCATCTCAAACCTCGATCGAG 1188 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | ||||| |||||||| || || |||| | || | | | ||||| | |||||| Sbjct 1187 ATCGATTCTTTATTTGAAGGTATGGATTTCTACACTTCGTTAACAAGGGCAAGGTTTGAA 1128 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| ||||| | || ||| ||| | |||||||||||| | ||| | | |||| Sbjct 1127 GAGCTATGTGCTGATTTATTCAGATCCACATTGGAACCAGTAGAAAAGGTTCTTAAAGAT 1068 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 || ||| | || || ||| || | |||| |||||| | || ||||||||||| ||||| Sbjct 1067 TCGAAGCTGGACAAGTCCCAAATTGATGAGATTGTGTTAGTCGGTGGATCTACCAGAATC 1008 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || |||| ||||| || |||| | ||| ||||| ||| | ||| | Sbjct 1007 CCAAAGATTCA-GAAAT--TAGTTTCTGACTTCTTCAATGGCAAAGAGCCTAATCGTTCT 951 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 | || || |||||||||||||| |||||||| || ||||||| || ||| | | || Sbjct 950 ATCAACCCGGATGAGGCTGTTGCTTATGGTGCAGCCGTTCAAGCTGCCATTTTAACCGG- 892 Query 552267 CAAACTGATGAAAAACTACAAAATATTGTACTTGTA---GATGTTACTCCTCTATCTCTT 552323 | | | || || || ||| || ||| |||| || |||||| | || | || || Sbjct 891 CGATCA-ATCAACAAAGACACAAGATT-TACTATTATTGGATGTTGCGCCATTGTCCCTA 834 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 || | ||||| | || || || |||||||| || || |||||| | || ||||| Sbjct 833 GGAATTGAAACTGCAGGCGGCATAATGACTAAGCTAATTCCTAGAAACTCAACGATTCCA 774 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || ||||| || ||||| ||| ||||||||||| ||| |||| ||||||| Sbjct 773 ACAAAGAAATCGGAAACCTTCTCTACCTATGCAGATAATCAACCTGGTGTTTTAATTCAA 714 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 | |||||||| ||||||| | || || |||||||| |||||||| || | ||| Sbjct 713 GTCTTTGAAGGTGAAAGAACAAGAACAAAGGATAATAACTTACTTGGTAAATTCGAATTA 654 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 || ||||| |||||||| | || || || |||||||| ||||| || |||||||| Sbjct 653 AGTGGCATTCCGCCTGCTCCCAGAGGTGTGCCTCAAATTGATGTTACCTTTGATATCGAC 594 Query 552564 GCCAATGGAATTTTGAATGTGACTGCTT 552591 || ||||| ||| | |||||| |||||| Sbjct 593 GCTAATGGTATTCTTAATGTGTCTGCTT 566 >seq1477 Length=2296 Score = 208 bits (230), Expect = 6e-48 Identities = 377/546 (69%), Gaps = 14/546 (3%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||||| ||||| || || ||||||| | || |||| || || || Sbjct 1705 GGTATTGATTTGGGAACAACTTACTCGTGTGTTGCTCATTTTTCCAATGATAGGGTAGAG 1764 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||| |||||||||||||| || || |||||||| ||||| ||||||| || || Sbjct 1765 ATAATTGCAAATGATCAAGGTAATAGGACCACTCCATCGTATGTGGCTTTCACAGACACC 1824 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 ||| ||| ||||||| || || ||| ||||||| | |||||| ||||| || Sbjct 1825 GAAAGATTAATTGGTGACGCCGCCAAAAATCAAGCTGCAATCAATCCTCATAATACAGTT 1884 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| || || |||||||| | | ||| ||||| | || | ||||| Sbjct 1885 TTTGATGCAAAGCGGTTAATTGGTCGTAAATTTGATGATCCTGAAGTGACGACAGATGCC 1944 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 ||||| | |||||| || || | ||| |||||| || || | || Sbjct 1945 AAGCACTTCCCTTTCAAAGTTATATCCAGAGATGGTAAACCTG-TAGTGCAAGTAGAATA 2003 Query 550298 GAAGGATCTGTTAAACAA-----TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352 |||| || |||| | ||| | || || ||||||| || |||||||||| | Sbjct 2004 TAAGG----GTGAAACGAAAACATTTACGCCTGAGGAAATTTCTTCCATGGTTTTAAGCA 2059 Query 550353 AAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAAC 550410 ||||||| |||| || || || || ||| | | | | | ||||| || |||| Sbjct 2060 AAATGAAGGAAACTGCTGAGAACTATT--TGGGAACTACGGTCAATGATGCTGTTGTAAC 2117 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| || |||||||| ||||| || ||| | ||||| ||||| ||||| ||| |||||| Sbjct 2118 TGTTCCTGCATATTTCAATGATTCTCAAAGACAAGCCACTAAGGATGCAGGAACTATTGC 2177 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 || | || ||| | ||||||||||||||||| ||||| || ||| |||| ||||| | Sbjct 2178 AGGGATGAACGTTTTACGTATTATCAATGAACCCACTGCAGCAGCAATTGCTTATGGCTT 2237 Query 550531 TGATAA 550536 ||||| Sbjct 2238 GGATAA 2243 >seq3689 Length=4188 Score = 190 bits (210), Expect = 2e-42 Identities = 384/563 (68%), Gaps = 14/563 (2%) Strand=Plus/Minus Query 368594 TTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAG 368653 |||| |||| ||| | |||||| ||||||||||| ||||| || || ||| ||| | Sbjct 2659 TTTCCAGAAATAGATATTGGGGTACTCCAATTCCTTTATGGGTTTCAGACGATTTTGAGG 2600 Query 368654 AAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTA 368713 | | || ||| | ||||| || ||||||||| ||||||| | ||||||| || || | Sbjct 2599 AGGTCGTCTGTGTTGGTTCTATCAAAGAATTGGAAGAATTGACCGGTGTGCGTAACATCA 2540 Query 368714 GTGATTTACATATTGATAAAATTGATCACATTAA-AATTCCATCAAAGAAAGGAAAAGGT 368772 ||| || ||| |||| ||||| || ||| | ||||||||| ||| |||| || ||| Sbjct 2539 CTGACTTGCATCGTGATGTCATTGA-CAAATTGACAATTCCATCCAAGCAAGGTAAGGGT 2481 Query 368773 TTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTAT 368832 || || |||||| |||||| ||||| ||||||||||| ||||||||||||||| Sbjct 2480 GACTTAAAGAGAATTGAAGAAGTTTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTAT 2421 Query 368833 GGTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTG 368892 | | ||||||||||||||| ||| || || | ||||| ||||| | | Sbjct 2420 GCTTCTCAACATTATCCATTTGAAAACACAGAAAAATTTGA-----CGAAAGAGT-TCCA 2367 Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 ||| |||| | | ||| | ||||||||| | |||||||| || || || || Sbjct 2366 GCTAATTTCATCTCTGAAGGTTTGGATCAAACAAGAGGTTGGTTCTACACGTTAGCTGTC 2307 Query 368953 TTA--TCCACAGCTATTT-TCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATT 369009 ||| | | || |||||| | | | | | || || || || || |||||||| Sbjct 2306 TTAGGTACCCATCTATTTGGCTCTGTTC---CATACAAGAACGTCATCGTCTCTGGTATT 2250 Query 369010 GTTAATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAAT 369069 || || | |||||| ||||||||| ||| | ||||| | ||||| Sbjct 2249 GTCTTAGCTGCCGATGGTAGAAAGATGTCTAAATCCTTGAAAAATTACCCTGATCCATCC 2190 Query 369070 ATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTA 369129 ||| | | | |||| |||||| ||| | || ||||| ||| | | |||||||| Sbjct 2189 ATTGTTCTGAACAAATATGGTGCGGATGCATTAAGATTGTACTTGATAAACTCACCTGTT 2130 Query 369130 GTAAAAGCAGAATCTATTAAATT 369152 ||||||| ||| | | ||||| Sbjct 2129 TTAAAAGCTGAAAGTTTGAAATT 2107 >seq1329 Length=1183 Score = 118 bits (130), Expect = 9e-21 Identities = 212/310 (68%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360 |||||||||| || | ||||| ||| | ||||| | || ||| || | || | | | Sbjct 500 TAGATGTTACCCCATTGTCTCTAGGTATCGAAACTTTAGGTGGTGTTTTCACAAGATTGA 559 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 | ||||| ||||||||||| || ||||||| | || || || | | | Sbjct 560 TTCCAAGAAACACTACTATTCCAACAAAGAAATCTCAAATCTTCTCCACTGCCGCTGCTG 619 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 ||||||| ||||| ||| | |||| |||| |||||| |||| || ||| || | Sbjct 620 GTCAAACTTCTGTTGAAATCAGAGTTTTCCAAGGTGAAAGAGAATTGGTTAGAGACAACA 679 Query 552481 ATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAA 552540 | |||||| || | ||||| ||||| || |||||||| || || || |||| Sbjct 680 AATTGATTGGTAACTTCACTTTAGCCGGTATCCCACCTGCTCCAAAGGGTGTCCCACAAA 739 Query 552541 TTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAAT 552600 | ||||| ||||| || ||||||||| |||| ||| | || || ||||| | || ||| Sbjct 740 TCGAAGTCACTTTTGACATCGATGCCGATGGTATTATTAACGTTTCTGCTAGAGACAAAG 799 Query 552601 CTAGCAACAA 552610 ||| ||||| Sbjct 800 CTACAAACAA 809 >seq2438 Length=362 Score = 111 bits (122), Expect = 1e-18 Identities = 241/357 (68%), Gaps = 8/357 (2%) Strand=Plus/Plus Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTA 551856 ||| | ||||| ||||||||||| || ||| |||| | || | | |||| || | Sbjct 10 CATTTGGGTGGTGAAGATTTTGACAACAGATTGGTCAACCAC--TTCATCCAAGAATTCA 67 Query 551857 AACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAAC 551914 | |||| ||||| || | ||||| | |||||| ||| | | ||||||| Sbjct 68 AGAGAAAGAACAAGAAGGACTTGTCTAC--CAACCAAAGAGCTTTGAGAAGATTAAGAAC 125 Query 551915 TGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGA 551974 |||||| ||||||||||| || || | || || ||||||| | ||||| | || Sbjct 126 TGCTTGTGAAAGAGCCAAGAGAACTTTGTCTTCCTCCGCTCAAACTTCCGTTGAAATTGA 185 Query 551975 TTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATAT 552034 || || || || || || |||| | || | || | || |||| ||| ||||| | Sbjct 186 CTCTTTGTTCGAAGGTATCGATTTCTACACTTCCATCACCAGAGCCAGATTCGAAGAATT 245 Query 552035 TTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAA 552094 ||| |||| | || ||| || | || ||||| ||| | || || |||||| | || Sbjct 246 ATGTGCTGACTTGTTCAGATCTACTTTGGACCCAGTTGAAAAGGTCTTGAGAGATGCTAA 305 Query 552095 GATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151 | || ||||| |||| |||||||||| | || ||||| ||||| |||||||| Sbjct 306 ATTGGACAAATCTCAAGTCGATGAAATTGTCTTGGTCGGTGGTTCTACTAGAATTCC 362 >seq2192 Length=1070 Score = 96.9 bits (106), Expect = 3e-14 Identities = 252/385 (65%), Gaps = 6/385 (2%) Strand=Plus/Plus Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 || |||| |||||||| || ||||| || ||||| || ||||||| | | | || || | Sbjct 64 GTATTAACCCAGATGAAGCCGTTGCATACGGTGCAGCCGTTCAAGCTGGTGTCCTATCCG 123 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 | ||| ||| | || ||||||| | | ||||| | || | |||||| Sbjct 124 G------TGAAGAAGGTGTCGAAGATATTGTTTTATTGGATGTCAACGCTTTGACTCTTG 177 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 || | ||||| ||| ||| | |||||| | || | ||||||||| |||||||| Sbjct 178 GTATTGAAACCACTGGTGGTGTCATGACTCCATTAATTAAGAGAAATACTGCTATTCCTA 237 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 || ||||| | | || ||||| || || ||| | | |||| || | Sbjct 238 CAAAGAAATCCCAAATTTTCTCTACTGCCGTTGACAACCAACCAACCGTTATGATCAAGG 297 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAG 552504 | | || || |||||| | |||| || || |||| | | |||| ||| | ||| Sbjct 298 TATACGAGGGTGAAAGAGCCATGTCTAAGGACAACAATCTATTAGGTAAGTTTGAATTAA 357 Query 552505 AAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATG 552564 || ||||| || || || | || ||||| ||||||||||| || || | | || | Sbjct 358 CCGGCATTCCACCAGCACCAAGAGGTGTACCTCAAATTGAAGTCACATTTGCACTTGACG 417 Query 552565 CCAATGGAATTTTGAATGTGACTGC 552589 | ||||| ||| |||| ||| |||| Sbjct 418 CTAATGGTATTCTGAAGGTGTCTGC 442 >seq1653 Length=3204 Score = 96.9 bits (106), Expect = 3e-14 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| || ||||| || || ||| ||||||| ||| | |||||||||| Sbjct 3062 TATCGGTATTGACTTAGGTACTACTTATTCCTGTGTTGCTGTGATGAAAAATGGTAAGAC 3121 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 ||||||| |||| ||||| ||||||||||||| || |||||||| || | ||||| || Sbjct 3122 TGAAATTCTTGCTAATGAGCAAGGTAACAGAATCACCCCATCTTACGTGGCATTCACCGA 3181 Query 550114 AACTGAACATTTAGTTGGTGATG 550136 |||| || ||||||||| Sbjct 3182 TGATGAAAGATTGATTGGTGATG 3204 >seq5323 Length=322 Score = 89.7 bits (98), Expect = 4e-12 Identities = 222/330 (67%), Gaps = 18/330 (5%) Strand=Plus/Plus Query 552231 TATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--ACAAACTGATGAAAAACTACAAA 552288 || ||||| || ||||||| |||||| | |||| || || | | || ||| ||| Sbjct 2 TACGGTGCTGCTGTTCAAGCTGCTATTTTGACTGGTGACGAA-TCCTCCAAGACT-CAAG 59 Query 552289 AT--ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTAT 552346 || ||||| ||| ||||| |||| |||| | ||| | ||||| | ||| ||| | Sbjct 60 ATCTATTGTTGTTG--GATGTCGCTCCATTATCCTTGGGTATTGAAACTGCTGGTGGTGT 117 Query 552347 TATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTC 552406 ||||| || | || ||||| |||| ||||| ||| ||||| || || || Sbjct 118 CATGACCAAGTTGATTCCAAGAAACTCTACCATTCCAACTAAGAAATCCGAAGTTTTCTC 177 Query 552407 TACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATT 552466 ||| ||| | || || ||| | | ||| |||||| |||| ||||| |||||| Sbjct 178 TACTTATGCTGACAACCAACCAGGTGTCTTGATTCAAGTTTTCGAAGGTGAAAGAGCTAA 237 Query 552467 CACTAAAGATAATAATCAACTTGGT-----ACTTTTAATTTAGAAGGTATTCCTCCTGCT 552521 ||||| || || ||||||| | | || |||| || |||||||| || ||| Sbjct 238 GACTAAGGACAA----CAACTTGTTGGGTAAGTTCGAATTGAGT-GGTATTCCACCAGCT 292 Query 552522 CCTCGTGGAGTACCGCAAATTGAAGTTACT 552551 || | || || || ||||||||||| ||| Sbjct 293 CCAAGAGGTGTCCCACAAATTGAAGTCACT 322 >seq1581 Length=1262 Score = 87.8 bits (96), Expect = 1e-11 Identities = 223/336 (66%), Gaps = 10/336 (3%) Strand=Plus/Minus Query 429113 AAATTCATAATCAATCCTTTAATATGATAACCGTCCACGTCTTGGTCAGCTAATATCATA 429172 || || ||||| || ||||||||||| |||| || ||||| || | | |||||| Sbjct 1242 AAGTTTATAATTAAACCTTTAATATGCGAACCATCATGATCTTGATCGGTCATGATCATA 1183 Query 429173 ATACTACCATACCTAAGTTCTTTTAGATCATTATATACTTTCCCTTGTTCAAGACCAATG 429232 | | ||||| || | |||| ||| | |||| || | |||| | || || Sbjct 1182 AGATGCCCATATCTTAAAGATTTTGTATCTTCATATTTCTTGCGATGTTGTAACCCCATA 1123 Query 429233 AtttttttGATAGCAGTTATTTCTTCATTTTCTGCTATTT--TCAACGGACT---TTTTG 429287 |||||||| || || ||||| | |||| | ||| | ||| | ||| || | Sbjct 1122 ATTTTTTTAATGGCTTGAATTTCCGCGTTTTTTAGTATCTGATCAGC--ACTAGCTTCTC 1065 Query 429288 TACGTACATTCAATGGTTTTCCCTTAAGTGGAAATACGCCATAATAATCTCGACCAATAA 429347 || ||||||| ||| || ||||||| | ||||||||||||| ||||| || Sbjct 1064 TA---ACATTCAGCATTTTACCACGAAGTGGATAACAACCATAATAATCTCTACCAACAA 1008 Query 429348 CATTTAGTCCAGACATTGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTAC 429407 || || || | | || || | || ||||| ||||| |||| || | |||| Sbjct 1007 CAGCTAAACCTGCAACAGCTAATGACAAGGCGGAATCCCCTTCTGTCAGAACTAAAGTAC 948 Query 429408 ATTTATATCCTTCTTTGGTACCAGCTTTGTGAGCAT 429443 ||||||| |||||||| ||||| ||||||| |||| Sbjct 947 ATTTATAGCCTTCTTTTGTACCGGCTTTGTTGGCAT 912 >seq1345 Length=4096 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 361721 GCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCT 361780 || || |||||||||||||| | | | | |||||| || || |||| || |||||| Sbjct 3309 GCCGCAGTTGGTTCGTTAATAACTCTCAAAACATTTAGGCCAGCTAACTTGCCGGCATCT 3368 Query 361781 AAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGC 361833 |||||||| | ||| | ||||||||||||||| ||||| ||||| ||||| Sbjct 3369 TTCGTGGCTTGCCTTTGAGAATCATTAAAATATGCTGGAACTGTAATAACTGC 3421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028976154483520