Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2458 235 7e-57 seq5123 100 3e-16 >seq2458 Length=2360 Score = 235 bits (260), Expect = 7e-57 Identities = 601/906 (66%), Gaps = 33/906 (4%) Strand=Plus/Plus Query 75704 CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTC 75763 || |||||||| || |||||||||||||| || || || ||| ||| | | ||| Sbjct 13 CTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTC 72 Query 75764 TGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTA 75822 | |||| ||| || || ||| | ||| ||||| |||||||| || || || Sbjct 73 TCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATA 131 Query 75823 CACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAA 75882 || || || | || ||| | | || |||| | |||| | | ||| | Sbjct 132 TACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATGGTA 188 Query 75883 GGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTG 75942 | ||| | || | || || || ||||| ||||| | | |||||||||||||||| Sbjct 189 TTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTG 248 Query 75943 TAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGA 76002 ||||| || ||| ||||| || || || |||||| ||||| | ||| || Sbjct 249 TAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTGTGA 308 Query 76003 AATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCT 76062 |||| | || ||| ||| | ||||| || |||||||| || ||||| || | ||| | Sbjct 309 AATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTT 368 Query 76063 TCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGAAAA 76107 ||| | || ||| |||| ||||| ||| | | | |||| Sbjct 369 ACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAAA 425 Query 76108 ACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTT 76167 | | |||||||| | || ||||||| ||| ||||| |||||||||| | |||| Sbjct 426 ATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTA 485 Query 76168 TTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGT 76227 || || ||||| ||| |||| || |||||| |||| ||||| |||| ||||||||| Sbjct 486 CTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGT 545 Query 76228 TCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAA 76287 |||||||||||| || || || ||| || | |||||||||| || |||||| Sbjct 546 TCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCG 605 Query 76288 GGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGA 76347 | | ||| | ||||||||||| || ||||| || ||| |||| || |||||| Sbjct 606 TTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 665 Query 76348 ATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGG 76405 | | ||| |||| | ||| | || || || || | || ||||| || || ||||| Sbjct 666 ACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGT 723 Query 76406 GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTC 76465 | || ||||||||||||||||| || || | || | || ||||| || Sbjct 724 ATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CACCTT 782 Query 76466 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 76522 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 783 AAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATGCCT 840 Query 76523 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAAC 76582 || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | || Sbjct 841 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCCAAT 900 Query 76583 ATCTAC 76588 || ||| Sbjct 901 ATGTAC 906 >seq5123 Length=1068 Score = 100 bits (110), Expect = 3e-16 Identities = 172/247 (70%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 323 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 264 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 263 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 205 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 204 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 145 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 144 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 85 Query 75466 CATCCAT 75472 |||||| Sbjct 84 TATCCAT 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596524499338240