Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3714 154 2e-32 seq2458 154 2e-32 >seq3714 Length=1178 Score = 154 bits (170), Expect = 2e-32 Identities = 411/619 (66%), Gaps = 8/619 (1%) Strand=Plus/Minus Query 69795 CATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCG 69854 ||| ||||| | || || || |||| || || |||| |||||| ||| | | || Sbjct 1167 CATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACG 1108 Query 69855 AATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTT 69914 || || | ||| ||||| | || ||||| |||| || || | |||||| ||| Sbjct 1107 GATGTTGTTGATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTT 1048 Query 69915 CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGA 69974 ||| || ||||| ||||| || || ||||| ||||| || | ||||| ||| Sbjct 1047 CAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGA 988 Query 69975 CATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTT 70034 ||||||| ||||| || || || || ||||| || || || ||||||||||| || | Sbjct 987 CATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCT 928 Query 70035 TTCAGAAAGCAGATTGTATGT-TTCAATAGCTGATTCTATATCCCACTGATGAATTCCTA 70093 | || | || ||| || || |||| | | ||||| ||||| | ||| || |||| Sbjct 927 TAACGACATCAAATTATAAGTCTTCAGCA-CAGATTCGATATCGCTACCATGGATACCTA 869 Query 70094 TCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACA 70153 ||| |||||||| | || ||||||||| |||||| || || | || | | | | || Sbjct 868 GCGCCACACGCATTACCAAATGCTGAGGACGTTCTGCCACTTCACCGTTCAGTCTTAGCA 809 Query 70154 GGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTCTCTTTCGTAA 70212 ||| || ||||| || || || || ||||| | || || ||| || || ||||| Sbjct 808 AGTACGAACGCTCCAGTGTCTTGAATCCGAAATACGTATACTGGAAA-TCCCTATCGTAC 750 Query 70213 ATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT--G 70270 | || | || || | |||| || | || | || || | ||| | | || | Sbjct 749 ACGATGGCCGAGTTCAAAGTATCTTTGTTTTCCATGACAATGT-TGTAA-ATTTCGTCCG 692 Query 70271 AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTA 70330 | || || |||| | || ||| | || |||| ||| | |||||| || || | Sbjct 691 AAATCATAGGAGCATGCTTTCCAGTAGCTGGGTTAATCCAGTCGTGTAAATCCTCAATAA 632 Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 | | ||| | ||| | |||| ||| ||||| || || ||||| ||||| || |||| Sbjct 631 CTTTGGAGAATTGCTTTGTGGTTTGCTTATGTAAGTTAGAGATGGCGATTCTAGCGGCTA 572 Query 70391 GAATAGCATAGTCAGGATG 70409 || | ||||| ||||| || Sbjct 571 GAGTGGCATAATCAGGGTG 553 >seq2458 Length=2360 Score = 154 bits (170), Expect = 2e-32 Identities = 555/858 (65%), Gaps = 24/858 (3%) Strand=Plus/Minus Query 68370 CAAT-GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 |||| ||||| ||||| | | ||||| | || || | | ||||||||||||||| | Sbjct 1288 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 1229 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| || |||||||||| |||||||||||||||||||| | |||| || Sbjct 1228 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGG---GG 1172 Query 68489 CTA-TATGAATA--TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCA 68545 | || ||| | |||| || ||| |||||| || | | | ||| || |||| Sbjct 1171 CACGTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 1112 Query 68546 TTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT 68605 | || || ||| ||||||| | ||||||||||| |||||| | | | || | || | Sbjct 1111 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAATTCTT 1052 Query 68606 CTGGAAGGCTCG-TATT--TTGAATGGATCCACCATCGGATATAATTATATTCT---TGA 68659 ||||| | | | || ||||||||| ||| | | |||| | || || | | Sbjct 1051 GTGGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCA 995 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | |||| ||| | | || || | | || | | || || || | | Sbjct 994 TACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCT 935 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||| || ||||| || | ||| | ||| ||||| || |||||| | | ||| Sbjct 934 GGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATT 875 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 |||||| |||| ||||| | || |||||||| ||||| ||||||| || || Sbjct 874 CATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAAT 815 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTT----AGATGTTTCCAATCCCAAAGATCA 68895 |||||| |||||| | ||||| ||||||| || ||| ||||||||| | | Sbjct 814 TTCTAATACCATGCTTCATGAT---ATCTTTTCTTAAGGTGTC-CCAATCCCACATGCCG 759 Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA 68955 | ||| | ||| | ||| | ||||| || || | | ||| ||||| | Sbjct 758 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 699 Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 | ||||| || || || |||| | ||||||||||||| || || | | | | | Sbjct 698 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 639 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 ||||| ||||| || || | |||| || | ||||| | ||| ||||| || Sbjct 638 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 579 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 |||| || || || | || || | || ||||| || | | | || |||||||||||| Sbjct 578 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 519 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 518 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 459 Query 69196 TTTCGGACTACTACTTTA 69213 || || || |||||| Sbjct 458 TTACGAGTAACAACTTTA 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686856869694720