Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2458 187 3e-42 seq5123 84.2 3e-11 >seq2458 Length=2360 Score = 187 bits (206), Expect = 3e-42 Identities = 582/894 (65%), Gaps = 29/894 (3%) Strand=Plus/Plus Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764 ||| | ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| Sbjct 4 TTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGG 63 Query 104765 TCTCTCTTTTGTCCAGACAAG-GCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGA 104823 | | || | |||| ||| || |||||| | |||| ||||| |||||||| Sbjct 64 ACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGA 122 Query 104824 AGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGA 104883 || || || || |||||| |||||||||| | | ||| | ||| | Sbjct 123 GGCTCTATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAA 179 Query 104884 TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAA 104943 | ||| | | ||| | | ||||||| || ||||||||||| | | | ||||||| Sbjct 180 ATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAA 239 Query 104944 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCT 105003 || || |||||| ||| ||||||||| || || ||||| |||||| || || | Sbjct 240 GGATGCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTT 299 Query 105004 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 105063 || ||||| | |||| ||| |||||| || ||||| |||||| | || || Sbjct 300 ATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTC 359 Query 105064 AATCGCTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTA 105111 | || | || | | || |||| |||| |||| | | Sbjct 360 CGTTGCCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTT 419 Query 105112 TGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAG 105171 ||||| | || ||| || | ||| ||| || || |||||||||| |||||| | Sbjct 420 CAAAAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCG 479 Query 105172 AAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 |||| ||||| ||||| || | ||||| ||||||||||| | ||||||| | | Sbjct 480 TAATTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTT 539 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291 |||||||| |||||||| || ||||| || | || |||||||||| || || Sbjct 540 GGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGA 599 Query 105292 AGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAG 105351 ||| | ||| | || ||||| || || ||||| ||| | | || || Sbjct 600 AGCCCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTC 659 Query 105352 TTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 || || | || || || |||||||| ||||| || | || ||||| ||||| || Sbjct 660 TTGTGAACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCA 719 Query 105412 AGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGAAG 105470 ||| | || || ||||||||||||| | | ||| | || | || ||||| Sbjct 720 AGGTATACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACA 778 Query 105471 CTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT----CATGGCTCC 105525 | || ||| || | |||| | || | ||| || | || |||| |||||| || Sbjct 779 C-CTTAAGAAAAGATATCATGAAGCATGGTATTAGAAA----TTCCTTGACCATGGCACC 833 Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 |||||| || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 834 AATGCCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 887 >seq5123 Length=1068 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 294 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 236 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 235 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 176 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 175 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 116 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCAT 104482 | || || ||||| |||||||| | || |||||| Sbjct 115 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCAT 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583216705483520