Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000756235.1_202014-09- 18] 6,048 sequences; 11,211,290 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1795 237 2e-57 seq5123 181 2e-40 seq2458 158 2e-33 >seq1795 Length=1834 Score = 237 bits (262), Expect = 2e-57 Identities = 840/1291 (65%), Gaps = 50/1291 (4%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 || || ||||| | || ||| || | || || | || ||||||||||||||||||| | Sbjct 552 GTAAATTGAATAGCAGCGGAGGCGGCTTGCGTTCTTAAGTAGTACATACCAGTTTTTAAA 611 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCG-GCTAT 75495 ||| |||| |||||||||||||| || || | || | | | ||| | ||| Sbjct 612 CCCTTCTTCCAACCGTAGAAATGCATACTAGTAATCTT--ACCCATT--GATGGTGCTTG 667 Query 75496 -ATGAATA--TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTT 75552 | ||| | |||| || ||| ||||||||| | | | |||||| ||||| || Sbjct 668 CAAGAAAAGATTCAAGGAATGAGACTGATCGATGTAGATGGCACGATCAGCAGCCATATT 727 Query 75553 TATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 75612 |||||||||||||||| |||||||| | |||||| | | || || | || | ||| Sbjct 728 GATAATGGTCTTTTGAGAGATTTCCCAGACGGTTTTGTATAGTTCCTTCAATTCTTGTGG 787 Query 75613 AAGATTTG-TATT--TTGAATGGATCCGCCATCAGATATAATTG--TATTCTTG-ATCTC 75666 | ||||| || |||||| || || || | ||||| |||| || || Sbjct 788 CACATTTGGTAAGCCTTGAATAGAACC---ATTTTGTGTAATTAGATATTGTTTCATACT 844 Query 75667 ATCATTCCACAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAA 75725 ||||| ||| ||| | ||| |||| | | || | || |||||||||| ||| | Sbjct 845 ATCATCCCA-AATACCCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGA 903 Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785 |||| ||||||| || | |||| ||| || || ||| |||||| | |||||| Sbjct 904 ATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAGCATTCAT 963 Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 75845 | | || | |||||| | |||||| || || ||||| ||||||| ||| |||| Sbjct 964 TATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAGAGTTTC 1023 Query 75846 TGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTA 75905 | | |||||| | || | | | ||| || ||||||||| | | ||||| Sbjct 1024 TTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCCCACATGCCAAATGGTT 1083 Query 75906 CAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTT 75965 | | | ||| | |||| |||||| ||| || || ||| || || | | | || Sbjct 1084 TAGCGTTCCACATATCGAATTGTAAAATACCCTTAGAAGCTGGAGAACCTTCAAAAGTAG 1143 Query 75966 CGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTG 76025 || | || || |||| || | ||| || || || | | | | | ||||| | Sbjct 1144 AATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAG 1203 Query 76026 TTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATA-ATGTAAA 76084 ||||||| || | || || ||| ||| ||| | | || ||||| || | | || Sbjct 1204 TTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTACTTC-CGATTCAAAGGGTAGACGCAAC 1262 Query 76085 AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 76144 | ||| | | ||| || | ||||| || |||| | ||||||||||||| || |||| Sbjct 1263 ATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTT 1322 Query 76145 GAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTG 76204 ||| || ||| || |||| || || |||||| || |||| | | || | | || || Sbjct 1323 GAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA-AGTTGTG 1381 Query 76205 ACAACT-ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---------TTTTCCATC 76254 | | | |||||| | | || | || | | |||| | | ||| ||||| Sbjct 1382 AGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATTATAGCTTGCAGTTTTACCATC 1441 Query 76255 TATCACAAACAT------ATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCT 76304 | || |||| | || || || ||||| |||| ||||||||| || | Sbjct 1442 T-TCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTT 1500 Query 76305 CATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAA 76364 ||| | || ||||| | || || |||| |||| | |||||||| || | Sbjct 1501 CATCCGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTTGATAGTACCTA 1560 Query 76365 GATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAG 76424 || |||||||| |||| ||||||||| ||||||||||| | || || || || | Sbjct 1561 AGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGTACCTG 1620 Query 76425 TTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTT 76482 |||| |||||| || | ||| | | || || ||| | ||||| ||| | ||| Sbjct 1621 TTTCTGTCTGTGCTTGCAAAATGGCATACC--ACAACTTTTGGGCTTTAATT---GTTTT 1675 Query 76483 GTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATC 76542 || |||||||| || | ||||||| |||||||||||| ||||| ||||| Sbjct 1676 ACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCAAATTCATCACCCCACACATC 1735 Query 76543 ATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCG 76602 ||| ||||| || || | || | | ||| | ||| ||||| || | ||| || Sbjct 1736 ATCTAAACCTGGGGCAGCACTGGGCGAAAACAAAGTCCAAGGCCCATCCTCTTGAACACG 1795 Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCA 76633 |||||| || |||||||| |||||||||||| Sbjct 1796 TTTCATGAAAAGATCAGGGATCCATAGAGCA 1826 >seq5123 Length=1068 Score = 181 bits (200), Expect = 2e-40 Identities = 455/686 (66%), Gaps = 4/686 (1%) Strand=Plus/Plus Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857 ||| ||||| | |||||||| ||||| ||||| |||| ||| ||| ||| || ||| Sbjct 12 CATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACG 71 Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917 ||| ||| ||| ||| || || || || || |||| || || | |||||| || Sbjct 72 AATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTT 131 Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977 ||| ||||| || || ||||| ||| || ||| ||||| || | ||||| || Sbjct 132 CAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGA 191 Query 76978 CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037 ||||||| | | ||| || ||||| ||||| || ||||| || ||||| || |||| Sbjct 192 CATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTT 251 Query 77038 TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTAC 77097 | ||| | | || || ||||| | | | || || ||||| | || || |||| Sbjct 252 TAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAG 311 Query 77098 AGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAA 77157 ||||| | ||| | | ||| || || ||||| | | | || ||| | | || Sbjct 312 TGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAA 371 Query 77158 GTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCTTTCGTAAA 77216 || || |||||||||||||||||||||||| |||| |||||| ||||| || || | Sbjct 372 ATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-TCTCTGTCATAGA 430 Query 77217 TAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAA 77276 ||| | || || | ||| ||||| | || | ||||||| |||| ||| | Sbjct 431 CAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTGTAGACATCATCAGAGA 490 Query 77277 TAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGT 77336 | || |||| | | ||| | || ||| || || || | | ||||| | || | Sbjct 491 TCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAAAGATCTTCGACAACCT 550 Query 77337 CGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAA 77396 |||| ||||| | |||| || |||| ||| || | ||| ||||| || ||||| Sbjct 551 TAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTCTGGCCGCTAGGG 610 Query 77397 TTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTGCCGCTAAAGTATCT 77455 | || || || ||||| ||||| || | || | |||| || ||||| | ||| Sbjct 611 TGGCGTAATCTGGATGAACAGTAGT-CATATAAGCGCATGTTTCAGCGGCTAAGTTGTCT 669 Query 77456 AATTCTATAGTAGTAACTCCGTTATA 77481 | ||| || || || || || | ||| Sbjct 670 AGTTCGATTGTTGTGACACCTTCATA 695 >seq2458 Length=2360 Score = 158 bits (174), Expect = 2e-33 Identities = 558/863 (65%), Gaps = 19/863 (2%) Strand=Plus/Minus Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 |||| ||| | || || ||||| | || ||||| | || || | | |||||||||| Sbjct 1295 TTCTGATCAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATA 1236 Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACT 75483 || || || | ||| |||||||||| |||||||| ||||||||||| ||| | Sbjct 1235 CCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTT 1176 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || | | | || ||||| || ||| |||||| || | | | ||| || Sbjct 1175 GGGGCACGTAAGAACAA-ATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGC 1117 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||| || || || |||||||| | ||||||||||| ||| ||| | | | || | Sbjct 1116 TGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAA 1057 Query 75604 ATCATCTGGAAGATTTG-TATT--TTGAATGGATCCGCCATCAGATATAATTGTATTCT- 75659 || | ||||| |||| || ||||||||| ||||| | |||| || || Sbjct 1056 TTCTTGTGGAACGTTTGGTAAGCCTTGAATGGA---GCCATTTTGTGTAATCAGATACTG 1000 Query 75660 --TGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAAC 75717 | || | |||| ||| | | || || | | || | | ||| || || Sbjct 999 TTTCATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCAC 940 Query 75718 AATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCAC 75777 || || ||||| || || || || | || | ||| ||||| || |||||| | Sbjct 939 AACCTGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAA 880 Query 75778 AGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAA 75837 | ||||||| | ||||| ||||| | || || ||||| ||||| ||||||| || Sbjct 879 ACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAA 820 Query 75838 ACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT----AGATATTTCCAATCCCAAA 75893 |||||| | |||||| | |||| ||||||| || | | ||||||||| | Sbjct 819 GGAATTTCTAATACCATGCTTCATGAT---ATCTTTTCTTAAGGTGTC-CCAATCCCACA 764 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | | ||| ||||| | ||| | ||||| || || | |||| |||| Sbjct 763 TGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATC 704 Query 75954 CATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013 | | | |||||||| | |||||||| | ||||||||| ||| || || | | Sbjct 703 CTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGG 644 Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG 76073 | | |||||| ||||| || || | |||| || | ||||| | |||||| | Sbjct 643 CATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATG 584 Query 76074 GATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133 | || |||| || || || | || || || || ||||| || | | |||| ||||||| Sbjct 583 GCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTAT 524 Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193 ||||| ||||||| || |||||| || |||||| |||||| ||| || | | | | Sbjct 523 GTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGT 464 Query 76194 TGAGATTTCTGACAACTACTTTA 76216 | | ||| | ||| |||||| Sbjct 463 TTAAATTACGAGTAACAACTTTA 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712880502159360