Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766165.2_202014-10-
12] 851 sequences; 11,606,437 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq656 365 6e-96
seq436 188 9e-43
>seq656
Length=34094
Score = 365 bits (404), Expect = 6e-96
Identities = 1337/2072 (65%), Gaps = 45/2072 (2%)
Strand=Plus/Minus
Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 11384 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 11325
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||||||||||||||||||||| |||||||| | | || |
Sbjct 11324 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 11265
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
|| | ||||| ||| ||| |||||| || || | | || || ||||| |
Sbjct 11264 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 11205
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072
| ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| |
Sbjct 11204 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 11146
Query 65073 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 65126
|||| ||||| || | |||||||| ||| | || ||||| || || | ||
Sbjct 11145 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 11089
Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186
| |||| ||| | | || || | | || | | || || || || ||
Sbjct 11088 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 11029
Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246
||||| || || || || | || | ||| ||||| || ||||| | | | |||
Sbjct 11028 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 10969
Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306
|||| ||||| ||||| | || |||||||| ||||| ||||||| || ||||
Sbjct 10968 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 10909
Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCCGAC 65363
|||| ||| ||| | | || |||||||| |||| ||||||| ||| | | |
Sbjct 10908 CTAACACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 10852
Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423
||| ||||| ||||| | | || |||||| |
Sbjct 10851 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 10792
Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483
|| |||||||| || ||||||| ||||||||||||| || || | | | | ||||
Sbjct 10791 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 10732
Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543
|| ||||| ||||| | ||||||| | |||||| ||||||||| || |
Sbjct 10731 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 10672
Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603
|| || || || | ||| || | ||||||||||| | | | || |||||||||||| ||
Sbjct 10671 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 10612
Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663
|| || || |||||| || ||| || |||||| ||| || | | | || | |||
Sbjct 10611 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 10552
Query 65664 C---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAATCG 65710
| | |||| | | ||| | || || |||| || | || || | |
Sbjct 10551 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 10492
Query 65711 --CTCATCTATTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACC 65765
|||| || ||| | || | || ||||| || |||| |||||||| ||
Sbjct 10491 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 10432
Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGTTCC 65824
|||| | | | | |||| | || ||| ||| ||| || | |||||||| ||
Sbjct 10431 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGACACC 10373
Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884
||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||
Sbjct 10372 TAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACC 10313
Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944
||||||| | |||| ||| | ||| | | ||| | | | || || || || ||
Sbjct 10312 AGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTT 10256
Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004
| |||| | ||||| | ||||| | || |||||||| || || ||
Sbjct 10255 ACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATC 10196
Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064
| || |||||| | ||| | | || | ||| || | || | || ||
Sbjct 10195 GCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACG 10136
Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124
||||| || |||||||||||||| ||||| || |||||||| | | | ||||||
Sbjct 10135 CTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTC 10076
Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184
|| || ||||| ||| ||| | || | | |||||| |||||| |||||||
Sbjct 10075 TTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAG 10016
Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244
||| | ||| | | ||||| | ||| || || ||||| || | || | || |||||
Sbjct 10015 GTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTT 9956
Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304
||| |||| | | ||| ||||| | ||| || || ||||| || || || | || ||
Sbjct 9955 ATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTA 9896
Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364
||| ||| |||||| ||| || |||||| || || || || |||| || ||
Sbjct 9895 AGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAAT 9836
Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424
|| || ||| || || || || || || ||||| ||| || ||| ||||| ||
Sbjct 9835 CAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAAC 9776
Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484
| ||||| |||||||| | ||| || ||||| || || || ||||| ||
Sbjct 9775 CAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGC 9716
Query 66485 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544
||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| |
Sbjct 9715 GTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCT 9656
Query 66545 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-T 66603
|| || |||| |||||| | ||| | | || || || | ||| | | ||||
Sbjct 9655 ACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGAC 9597
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAA 66662
||| ||| | | || || || |||||||||||||||||||||||| |||| ||||
Sbjct 9596 CGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA 9537
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722
|| |||| || || | ||| | ||||| | ||||||||| | || | || | ||
Sbjct 9536 AA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTG 9478
Query 66723 ATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 66782
| | | || || || |||| | || ||| | || |||||| || | |
Sbjct 9477 TAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTATAA 9418
Query 66783 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 66842
| ||| || | || | | |||| ||||| | |||| ||| |||| ||| || | |||
Sbjct 9417 AGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCA 9358
Query 66843 ATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
||||| || |||| |||| ||||| |||||
Sbjct 9357 ATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 9326
>seq436
Length=15573
Score = 188 bits (208), Expect = 9e-43
Identities = 401/595 (67%), Gaps = 8/595 (1%)
Strand=Plus/Plus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||||||||
Sbjct 270 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 329
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || | |||||||| | || | |||||| | ||| || ||||| ||||| || ||
Sbjct 330 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 389
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGC 36324
|| || || | ||||| | | |||||||||| ||||| || ||| ||| || |
Sbjct 390 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGGCGTC 448
Query 36325 ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384
| ||| || ||||| || |||||| |||||||||| | || || || |
Sbjct 449 AGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTG 508
Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444
|| ||||| || | | | |||| ||| || || | || ||||| ||||| |
Sbjct 509 AATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAA 568
Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504
|| |||| || ||||| |||||||| ||||| || |||||||||| | ||
Sbjct 569 GGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGC 628
Query 36505 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 36564
||| | ||| || ||||| || | || ||| | || |||||||| || || |||||
Sbjct 629 CTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTC 688
Query 36565 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAG 36621
| || || ||||| || | || || ||| || | ||||| | || ||
Sbjct 689 AGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCT 748
Query 36622 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 36681
|| ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || ||
Sbjct 749 GTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 808
Query 36682 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736
|| || || || | |||||| ||||| || | || || |||| ||||
Sbjct 809 TTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658165798686840
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