Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766165.2_202014-10- 12] 851 sequences; 11,606,437 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq656 367 2e-96 seq436 212 9e-50 >seq656 Length=34094 Score = 367 bits (406), Expect = 2e-96 Identities = 1342/2074 (65%), Gaps = 49/2074 (2%) Strand=Plus/Minus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 11384 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 11325 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832 | | || |||||||||| ||||||||||| |||||||| | | || | Sbjct 11324 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 11265 Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892 || | ||||| ||| ||| |||||| || || | | || || ||||| | Sbjct 11264 GTAAGAACAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATGT 11205 Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 78951 | ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||| | Sbjct 11204 TAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCTTGT 11146 Query 78952 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCT---TGATC 79005 |||| ||||| || | |||||||| ||| | || ||||| || || | || Sbjct 11145 GGAACGTTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCATA 11089 Query 79006 TCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 79065 | |||| ||| | | || || | | || | | || || || || || Sbjct 11088 CCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGG 11029 Query 79066 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCA 79125 ||||| || || || || | || | ||| ||||| || |||||| | ||||| Sbjct 11028 AATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTCA 10969 Query 79126 TTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTT 79185 |||| ||||| ||||| | || ||||| || ||||| ||||||| || |||| Sbjct 10968 TTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTT 10909 Query 79186 CTAAGACCGTATGATCTGATTTTATCTTTTAG--AGAT-TCCCAATCCCAAAGATCAGAC 79242 |||| ||| ||| | | || |||||||| || | ||||||||||| | | | Sbjct 10908 CTAACACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCGTAG 10852 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || | ||| | |||| | ||||| ||||| | | ||| |||||| | | Sbjct 10851 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 10792 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 ||||| || || || ||||| | |||| ||||||| || || | | | | |||| Sbjct 10791 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 10732 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || ||||| || || | |||| || | ||||| ||||||||| || | Sbjct 10731 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 10672 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 || || || || | ||| || | ||||||||||| | | | || |||||||||||| || Sbjct 10671 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 10612 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || || |||||| || ||| || |||||| ||| || | | | || | ||| Sbjct 10611 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTA 10552 Query 79543 C---TGACTATT-----ACTTTGACCACATCCTTT--AGTT---TGAGAAAATCAAATCG 79589 | | || | | | ||| | || ||| |||| || | || || | | Sbjct 10551 CGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCA 10492 Query 79590 TCCATCTA--TTACAAACA-TGTTC--AACGCGACAGATGCCAGATTACAAACGGCTACC 79644 ||| | || ||| | || | || || || || |||| |||||||| || Sbjct 10491 TCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTT 10432 Query 79645 TCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 |||| | | | | |||| | |||||| ||| | ||| |||| ||| ||| Sbjct 10431 TCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCT 10372 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 || |||| ||||||| ||| ||||||| |||||||| |||| || ||| || |||||| Sbjct 10371 AAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCA 10312 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTG 79824 |||||| | |||| ||| | ||| | | ||| | | | || || || || ||| Sbjct 10311 GTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTCTTA 10255 Query 79825 TATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCG 79884 | |||| | ||||| | ||||||| || |||||||| || || |||| Sbjct 10254 CCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCG 10195 Query 79885 TCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGT 79944 ||| |||||| | ||| | | || | ||| |||| || | || || Sbjct 10194 CTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGC 10135 Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004 ||||| || |||||||||||||| ||||| || | |||||| | | | ||||| Sbjct 10134 TTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCT 10075 Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064 || || ||||| ||| ||| | || | | ||||||| |||||| ||||||| | Sbjct 10074 TTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGG 10015 Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124 || | ||| | | || |||| ||| || || ||||| || | || | || |||||| Sbjct 10014 TAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTA 9955 Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184 || |||| | | ||| ||||| | ||| || || ||||| || || || | || || Sbjct 9954 TTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAA 9895 Query 80185 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 80244 ||| | | |||||| ||| || |||||| || || || || |||| || || Sbjct 9894 GAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATC 9835 Query 80245 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGT 80304 || || ||| || || || || || || ||||| || || || ||||| || Sbjct 9834 AAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACC 9775 Query 80305 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364 | ||||| |||||||| | ||| || ||||| || || || ||||| ||| Sbjct 9774 AAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCG 9715 Query 80365 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 80424 || ||||| ||||| ||||| | || ||||| || | ||| | || ||||| | Sbjct 9714 TGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTA 9655 Query 80425 TGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TT 80483 || || |||| ||||| | ||| | | || || || | ||| | | |||| Sbjct 9654 CCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTGACC 9596 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAA 80542 || ||| | | || ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 9595 GTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAA 9536 Query 80543 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 80602 | |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 9535 A-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT--- 9480 Query 80603 TGGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 80659 || || | | | || || || |||| | || ||| | || ||| || || | Sbjct 9479 TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTAT 9420 Query 80660 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGG 80719 | | ||| || | || | | |||| ||||| | |||| || |||| ||| || | || Sbjct 9419 AAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGG 9360 Query 80720 CTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | |||||||| |||| |||| ||||||||||| Sbjct 9359 CAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 9326 >seq436 Length=15573 Score = 212 bits (234), Expect = 9e-50 Identities = 404/594 (68%), Gaps = 6/594 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||||||| Sbjct 270 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 329 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || | |||||||| | || | |||||| | ||| || ||||| ||||| || || Sbjct 330 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 389 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--- 50127 || || |||| ||||| | | |||||||||||| ||||| || ||| | |||| Sbjct 390 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 449 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 ||| || ||||| || |||||| |||||||||| | || || || | Sbjct 450 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTGA 509 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 |||||||| || | | | |||| ||| || || | |||||||||||||| | Sbjct 510 ATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAG 569 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 || |||| || ||||| |||||||| || || || |||||||||| | ||| Sbjct 570 GAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCC 629 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367 || | ||| || ||||| || | || |||| | || |||||||| || || |||||| Sbjct 630 TCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCA 689 Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGTTAGT 50424 || || ||||| || | || || ||| | | ||||| | || Sbjct 690 GAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTG 749 Query 50425 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 50484 || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || || Sbjct 750 TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGCT 809 Query 50485 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || || || || | |||||| ||||| || | ||| ||||||| |||| Sbjct 810 TCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261159415640