Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766165.2_202014-10- 12] 851 sequences; 11,606,437 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq436 176 4e-39 >seq436 Length=15573 Score = 176 bits (194), Expect = 4e-39 Identities = 542/825 (66%), Gaps = 39/825 (5%) Strand=Plus/Plus Query 12874 AACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAA 12933 |||||| ||||| || ||||| || || || | || || || |||||||| |||||||| Sbjct 2 AACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTTTCCATGAAATCGAA 61 Query 12934 AGGATTTTTCGAACAA-TAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992 || |||| ||| | |||||||| || || || | | |||| |||||| || | Sbjct 62 GGGGTTTT-CGACCTTGTAGTATTTCTTGTTACCGAAAGCGACCAACAGTCTGTCGGCGA 120 Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052 | ||||| | ||| || |||||||| ||| |||||| |||| || || || | | Sbjct 121 CGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGG 180 Query 13053 CTTCTGTTAAAAAGt---ttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTA 13109 | || || |||| ||| ||| || || || || ||| | || || | | | | | Sbjct 181 CGTCC---AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAATTTTT-TCA--A 234 Query 13110 CGTTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAG 13165 || | || || |||| | | ||| |||| || |||||||| || | Sbjct 235 CGATGGCTGGGTCTGG-TTTGTTCTTCAAATGGGCGAACAACAAGCATGCAAAGTCGGTG 293 Query 13166 TGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCT 13225 ||||| ||||| ||||||| || | ||||| ||||| |||| ||| ||||| | ||| Sbjct 294 TGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCT 353 Query 13226 CGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCT 13285 | ||||| | ||| || || | ||||| ||||| || ||||| | ||||||| | Sbjct 354 CTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAG 413 Query 13286 GCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTA-TCCACTTTCTGGC 13344 ||||| || | | ||||||||| || | | ||| | |||| || || Sbjct 414 GCAAAGGCAACTAGTCTTTCACCAAACA-AGGCGTCAGCGTCTTGAATCCATCTTAAAGC 472 Query 13345 CCAGTTTGCTTTTTGTTTAACGCAGTTC----ATATTTTCTATTGCGTTAAATAAATAAt 13400 ||| | || || | || | ||| || | | || || || || || | | Sbjct 473 CCATTCGGCCTTCTC----ACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATT 528 Query 13401 ttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAA 13460 |||| ||| ||| || |||||||| ||||| ||| || |||| || |||| Sbjct 529 CACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAA 588 Query 13461 TATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGG 13520 ||||||| ||| ||||||||||| || |||| | ||||||| | || ||||||| Sbjct 589 TATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGG 648 Query 13521 AGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAA 13580 | | || |||| | |||||||| ||||| || |||||| ||| || ||||| |||| Sbjct 649 TGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAA 708 Query 13581 G---TATGTGCTTAATAAAt---tttttttCGTT--TTCTGACAACTTTAACCAATCTGG 13632 | | || | | |||| | || ||||| ||||| || ||| || | Sbjct 709 GAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTG-----TTGTTCCAGTCATG 763 Query 13633 AAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677 | ||| || || ||||| | || ||| ||||||| |||||||| Sbjct 764 GATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430977930039102