Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10- 12] 607 sequences; 11,646,928 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq388 203 2e-47 >seq388 Length=30020 Score = 203 bits (224), Expect = 2e-47 Identities = 553/837 (66%), Gaps = 45/837 (5%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 17644 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 17703 Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 || ||| ||| ||||||||| | ||| | || || | ||| | || || | Sbjct 17704 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 17762 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 |||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || | Sbjct 17763 GTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 17822 Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771 |||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 17823 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 17882 Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 17883 TAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAAC 17942 Query 101832 TTTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------AC 101864 ||| |||| | || ||||| ||| ||| || || Sbjct 17943 GTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAAC 18002 Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 |||||| ||||| || | ||| || |||||||| ||||||| || || | Sbjct 18003 TGACATAGAATTGTGAAAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTG 18062 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATC 101983 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| Sbjct 18063 GGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATA 18121 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042 | |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 18122 ACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTT 18180 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 || || ||||||||||| |||||||| || || || || ||||||||| | | || || Sbjct 18181 AGCACCAAAATGCCTCCATTGAAATCCGTAAACGGGCCCCAGATCTCCTACTTTCCTATC 18240 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 18241 TTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 18300 Query 102163 -AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 18301 TTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAG 18357 Query 102220 AACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAA 102276 | | |||||| ||| || |||| || |||| ||||| || |||| ||| Sbjct 18358 TATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAA 18417 Query 102277 ACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 |||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 18418 ACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 18474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248527531357