Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10- 12] 607 sequences; 11,646,928 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq541 147 2e-30 >seq541 Length=38674 Score = 147 bits (162), Expect = 2e-30 Identities = 531/823 (65%), Gaps = 17/823 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||| |||||| ||||| || |||||||| ||||| ||| || || ||| Sbjct 18 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 77 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| |||||||| || ||| | ||| | | ||| | ||| | | | || Sbjct 78 TCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTTGTTACCGAAAGCGACCAA 136 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 | ||| || || | ||||||| ||||| |||||| ||| |||||||||| | Sbjct 137 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 196 Query 13548 TTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTATAGACACAGCCTCGTTTA 13603 || || | | || || | ||||| ||| || |||||||||| | | Sbjct 197 AGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGA 252 Query 13604 TAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACG 13663 ||| | | || |||| | || | || | ||| || | || || | Sbjct 253 CAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATG 312 Query 13664 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13723 |||| || || | || || ||||||| || | |||||| ||||| ||||| || | Sbjct 313 CAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGG 372 Query 13724 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 13783 |||||| |||| ||||| ||||| || || | || || || ||||| || || | | Sbjct 373 GCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACAC 432 Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCC 13843 | |||| | ||||| || | ||||| ||| |||||| | || | || | |||| Sbjct 433 CTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGGATCC 492 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 || || ||||||||| | || | || || || | || |||||||| | Sbjct 493 ATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACA 552 Query 13904 AATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 | ||| | ||||||| | ||||| |||| ||||| || | ||| || |||| Sbjct 553 AGAATTCACTTTCTTTAGGGTCCTTGA--TGTAAGTATCGATCAACAAGGAGTAAGTTTC 610 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 |||||| || ||||| || || || ||||| || |||| | || |||| ||| Sbjct 611 AGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTG 670 Query 14022 TACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081 || || | | | || |||| |||||||||||||||||||||| ||| ||| || || Sbjct 671 GACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAA 730 Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATC 14138 ||| || | | | ||| || || ||| | | ||| | | || ||||| || Sbjct 731 AAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTC 790 Query 14139 GGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14181 | ||||||||| | ||| | ||| ||| | ||||| ||| Sbjct 791 ATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585168707480