Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10-
12] 607 sequences; 11,646,928 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq388 91.5 2e-13
seq274 89.7 8e-13
>seq388
Length=30020
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/225 (71%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092
||| ||| | | || |||| || || ||| || ||||||||||| || ||||||||
Sbjct 18262 TTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATT 18203
Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150
|| |||||||| | || | || || |||| ||||| ||| |||||| | || ||
Sbjct 18202 TCAATGGAGGCATTTTGGTGCTAAATACA-AGACGTGCGATGAC-GACTATACTGGACAA 18145
Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209
||| ||||||||||| | ||| | ||| | | || ||||| ||||| ||||| ||
Sbjct 18144 GGTATTGATCAATTG-AAACAGGTTATTCATAAACTAAAGACAAATCCCTACGATAGAAG 18086
Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGC 70254
||| | ||| | | ||||| || || ||||| || |||||||
Sbjct 18085 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGC 18041
>seq274
Length=39241
Score = 89.7 bits (98), Expect = 8e-13
Identities = 310/475 (65%), Gaps = 13/475 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || ||
Sbjct 15189 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 15248
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992
| ||||| ||||| || || | || ||| || | |||||| | || || ||
Sbjct 15249 ATCTTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 15305
Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052
|| ||||| ||| || ||| | || ||| | ||||||||||| ||| | || |||
Sbjct 15306 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 15365
Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111
||||| | | || | || || || | || ||| | |||||| | || || ||
Sbjct 15366 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 15424
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171
||||||||| || || ||||||| |||| || || || |||| | || | ||
Sbjct 15425 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 15481
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| | || | ||| | |||| || ||||| || ||||| || || | | || |
Sbjct 15482 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 15541
Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||| | || | | || | | || ||| |||| || ||||||| |
Sbjct 15542 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 15600
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
| || | ||| |||||||| || ||| | |||| || || || || |||||
Sbjct 15601 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 15655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053577213320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |