Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10-
12] 607 sequences; 11,646,928 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq541 174 1e-38
>seq541
Length=38674
Score = 174 bits (192), Expect = 1e-38
Identities = 550/839 (66%), Gaps = 39/839 (5%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || |||||| ||||| || ||||| || || || | || || || |||
Sbjct 18 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 77
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTTACACCCTAATTCTAGTAA 12978
||||| |||||||| || |||| ||| | |||||||| || || || | | ||
Sbjct 78 TCCATGAAATCGAAGGGGTTTT-CGACCTTGTAGTATTTCTTGTTACCGAAAGCGACCAA 136
Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAA 13038
|| |||||| || || ||||| | ||| || |||||||| ||| |||||| |||| ||
Sbjct 137 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 196
Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTATATCAACTGCTTCGATAAC 13095
|| || | || || || |||| ||| ||| || || || || ||| | ||
Sbjct 197 AGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGAC 253
Query 13096 TATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATAC 13151
|| | | | | || | || || |||| | | ||| |||| || |
Sbjct 254 AATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCAAATGGGCGAACAACAAGC 309
Query 13152 ATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGAC 13211
||||||| || |||||| ||||| ||||||| || | ||||| ||||| |||| ||
Sbjct 310 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 369
Query 13212 CCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTA 13271
| ||||| | |||| ||||| | ||| || || | ||||| ||||| || ||||| |
Sbjct 370 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 429
Query 13272 TTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT- 13330
||||||| | ||||| || | | ||||||||| || | | |||
Sbjct 430 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA-AGGCGTCAGCGTCTTGG 488
Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC----ATATTTTCTATTGC 13386
||||| || ||||| | || || | || | ||| || | | || ||
Sbjct 489 ATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTCTGGGATGGTGTGAATGGC 544
Query 13387 GTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATA 13446
|| || || | | |||| ||| ||| || |||||||| ||||| ||| ||
Sbjct 545 ATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTA 604
Query 13447 CATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGA 13506
|||| || ||||||||||| ||| ||||||||||| || |||| | |||||||
Sbjct 605 AGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGG 664
Query 13507 TACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGC 13566
| || ||||||| | | || |||| | |||||||| ||||| || |||||| |||
Sbjct 665 AATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 724
Query 13567 AGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---tttttttCGTT--TTCTGACAAC 13618
|| ||||| ||||| | || | | |||| | || ||||| |||||
Sbjct 725 GGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTG----- 779
Query 13619 TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677
|| ||| || | | ||| || || ||||| | || ||| ||||||| ||||||||
Sbjct 780 TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430979211673014
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |