Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10-
12] 607 sequences; 11,646,928 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq274 105 7e-18
seq253 89.7 5e-13
>seq274
Length=39241
Score = 105 bits (116), Expect = 7e-18
Identities = 287/437 (66%), Gaps = 7/437 (2%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || || ||||||| || || || || || || ||||| || |||||| ||
Sbjct 14928 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 14987
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| | | |||| ||||| ||| || |||| ||||| | | ||||| |||||
Sbjct 14988 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 15047
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || ||| || || || || || | | |||| || | ||| | | |||||
Sbjct 15048 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 15107
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||| || || || || ||||| | | |||||| | || || |||||
Sbjct 15108 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 15167
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || || || |||||||||||| | || ||| | || || | ||
Sbjct 15168 AACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 15227
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| || || ||||| || || | | ||| || || | | ||||||||||| ||
Sbjct 15228 CTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 15287
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | || ||||| | ||| ||||| ||| | || || ||||| |||
Sbjct 15288 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 15344
Query 94309 AAACGCGTCG-AGAAAA 94324
|| || |||| ||||||
Sbjct 15345 AAGCGTGTCGAAGAAAA 15361
>seq253
Length=24452
Score = 89.7 bits (98), Expect = 5e-13
Identities = 275/424 (65%), Gaps = 6/424 (1%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || | |||||||| || || || || || |||||||| |||||| | ||
Sbjct 5705 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 5764
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||| ||| || |||| || | | || || ||||| | || |
Sbjct 5765 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 5824
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || || || | || | | || || || | ||| ||| ||||| || |
Sbjct 5825 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 5884
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
|| |||||||| || || || ||||| | | |||||| | || || ||||| ||
Sbjct 5885 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 5944
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || || ||||||||||||||| | ||| ||| ||||||| | | | |
Sbjct 5945 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 6004
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||| ||||| || || | | || |||| | |||| | || || || ||
Sbjct 6005 AGCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGA-- 6062
Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
|| | | || ||||| | ||| ||||| ||| | || |||||||| |||||||
Sbjct 6063 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGACCTTTTCATGAAAC 6121
Query 94313 GCGT 94316
| ||
Sbjct 6122 GTGT 6125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719446287720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |