Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10- 12] 607 sequences; 11,646,928 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq392 107 1e-18 >seq392 Length=40014 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||||| | ||| | ||||| ||| ||| || ||||| ||||||||||| Sbjct 27277 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 27218 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| | |||| || | ||||||||||||||| |||| || |||||||| | || Sbjct 27217 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27158 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||| || || || | | | || || | || || Sbjct 27157 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 27098 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || |||||||| || || ||||||||||| Sbjct 27097 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27051 Score = 95.1 bits (104), Expect = 9e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||||||||| | ||| |||||| ||||| || |||||||| || ||| | |||| Sbjct 27720 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 27661 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| || ||||||||||| |||| || |||||||| | |||| || |||||||| Sbjct 27660 TTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 27601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380934781895061