Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766175.2_202014-10- 12] 607 sequences; 11,646,928 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq541 196 4e-45 >seq541 Length=38674 Score = 196 bits (216), Expect = 4e-45 Identities = 556/847 (66%), Gaps = 23/847 (3%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||||| || || |||| |||||||||||| ||||| || || | || Sbjct 8 AACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAA 67 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTA 4365 || || |||||||| ||||| || || || | ||||| | ||| || || | Sbjct 68 GGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAA 127 Query 4366 GAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 ||| || | || || ||| || || || || | || ||| |||| | || ||| | Sbjct 128 -AGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCA 186 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTATAGTTACGG 4482 | || | || || |||| |||| ||| || | | ||||| || || | Sbjct 187 TACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAATTTCCACAG 243 Query 4483 CTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACA 4542 | || |||| || | || | | || |||||| || || | | |||| Sbjct 244 CCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGGGCGAACA 303 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 | || || ||||| || ||||||||||||||||| | |||| |||||| ||||| | Sbjct 304 ACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGG 363 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 |||| |||||||| | |||||||||||| | ||| || || | |||||| || || || | Sbjct 364 TTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGA 423 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 | || | ||||| | || |||||| || |||| || || ||| || | | || Sbjct 424 AAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGT 483 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAATTGTGTATA 4779 ||| |||||| |||| ||||| | || |||| | || || || |||| | Sbjct 484 CTTGGATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGATGGTGTGAA 540 Query 4780 TAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTA 4836 | || || || |||| ||||| || | ||||| | || ||||| || || | | Sbjct 541 TGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAAGTATCGATCAACA 597 Query 4837 GGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAG 4896 | || ||||||| || |||||||| || || || || ||||| || | | | Sbjct 598 AGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTG 657 Query 4897 CTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGT 4956 | |||| | ||| |||||| | | || |||| || |||||||| || || ||||||| Sbjct 658 CCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGT 717 Query 4957 CACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT- 5015 || || || ||||| || | ||| || || || | |||| || | | Sbjct 718 CAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTC 777 Query 5016 --TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073 || ||||||| | | ||| |||| ||||||| ||||||| | ||||| || || | Sbjct 778 TGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAG 837 Query 5074 CTTCCGC 5080 |||| || Sbjct 838 CTTCGGC 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046440767131