Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766185.2_202014-10- 12] 554 sequences; 11,624,690 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq224 118 9e-22 >seq224 Length=44098 Score = 118 bits (130), Expect = 9e-22 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| ||| | ||| | ||| |||||| |||||||||||||||| || || | Sbjct 27239 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 27180 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| || |||||||||||| | | || || | || ||||| || | || |||||| Sbjct 27179 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 27120 Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688 ||| ||||||| ||| | | | || |||||||||| ||| || || | |||| Sbjct 27119 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 27062 Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||||||||| | ||| || || ||||||||||| Sbjct 27061 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27024 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || ||||| ||||| | || ||| || |||||||| ||||||| Sbjct 27479 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 27420 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || |||| ||||| ||||||||| | | || || | || ||||| || Sbjct 27419 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 27360 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||||||| |||||| ||| | | || || |||| || || Sbjct 27359 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 27300 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || |||||||||||||| | ||| || ||||| |||||||| Sbjct 27299 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 27252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248355764554