Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766185.2_202014-10-
12] 554 sequences; 11,624,690 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq438 194 4e-44
seq275 190 5e-43
seq513 122 2e-22
>seq438
Length=34054
Score = 194 bits (214), Expect = 4e-44
Identities = 697/1076 (65%), Gaps = 57/1076 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | ||||| ||| |||||| || |||| || || || ||||| |||
Sbjct 9706 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 9765
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || |||||||| || | ||||| | ||| |
Sbjct 9766 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 9824
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 9825 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 9884
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780
| || | ||||||| || ||| || |||| | || || | |||| |||
Sbjct 9885 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 9939
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| || | || || || | || || ||||||||||| | |||| | |
Sbjct 9940 ATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 9997
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| |||||||| | || || || || ||||| ||||| ||||| ||| |||| |
Sbjct 9998 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 10057
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| ||
Sbjct 10058 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 10117
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| |||||||| || || | | | || ||| || | || | |||
Sbjct 10118 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 10177
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||| ||| | |||| | |||||||| | || |||||||| || |
Sbjct 10178 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 10237
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
| || ||| | | | ||||||| || || || || |||||| | |||| ||
Sbjct 10238 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 10293
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | ||||| ||| | || ||| | ||
Sbjct 10294 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 10353
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| || || | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 10354 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 10409
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||||| | ||||| || || ||||| || |||||| | || || | || | || ||
Sbjct 10410 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 10469
Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351
| ||| || | |||||| |||| |||| || | || |
Sbjct 10470 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 10525
Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411
|||| | | | || |||| | ||| | ||| || || || ||||| || |
Sbjct 10526 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 10585
Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470
| || |||| |||| || |||||| | ||| | || |||| | | ||||| ||
Sbjct 10586 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 10644
Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530
|| ||||||||| ||| ||| || | || |||||||||| || || ||| |
Sbjct 10645 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 10704
Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
||||||| | ||||||||||| || ||| |||| | ||| ||||| |||||
Sbjct 10705 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 10760
>seq275
Length=24457
Score = 190 bits (210), Expect = 5e-43
Identities = 1067/1681 (63%), Gaps = 49/1681 (3%)
Strand=Plus/Minus
Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423
|| || | |||| || ||||| |||||||| ||||| ||||| || ||| |
Sbjct 18947 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 18888
Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483
| | || ||||| | | ||||| || |||||| || |||||||||| || |
Sbjct 18887 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 18828
Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543
||||||||| | ||| | || | | | | | || ||||| || | || |
Sbjct 18827 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 18770
Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601
| || |||| ||||| | ||||| | | ||| ||||| || | |||| || ||||
Sbjct 18769 GATACTTCATTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 18710
Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
|||| || |||||| | |||||||| || || ||||| ||||| | ||| || |
Sbjct 18709 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 18651
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | |||||| | |||||||| | |||||| || ||||| | ||| |||| |
Sbjct 18650 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 18591
Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777
||| | |||| ||| || ||| || || || |||| | || ||| || ||||
Sbjct 18590 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 18534
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837
||| ||||||| || | |||||||| | || || ||||||||||| ||| |
Sbjct 18533 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 18474
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|| || || || | | | ||||| ||||| ||||| || || ||| | || ||
Sbjct 18473 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 18414
Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
| |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| |
Sbjct 18413 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 18355
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016
|||| | ||| ||||| || || | | | | | |||| | | |||| || ||
Sbjct 18354 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTGTTTTCGCC-CA 18296
Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
|| || |||| | ||||| |||||||| || | || | ||||| |
Sbjct 18295 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 18236
Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134
| ||| || ||| | | | |||| |||||| || || ||| | |||| ||||||
Sbjct 18235 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 18180
Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194
|| | | |||| || ||||| ||||| | ||| | || || || | || ||| |
Sbjct 18179 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 18120
Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253
||| | ||||| ||| || | ||||| || || | | || ||||| || || |
Sbjct 18119 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 18061
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||| || | || || || ||||| || ||||| | || || || || || || ||
Sbjct 18060 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 18001
Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361
|| || | ||||||||| || | | || | | || | ||
Sbjct 18000 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 17942
Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412
||| |||| ||| ||| | ||| ||||||||| ||||| |||||
Sbjct 17941 AGATTGCTAAAGTCAT--TACCCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 17884
Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472
| |||| || || ||| |||||| ||| | || |||| ||||||||| |||||
Sbjct 17883 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 17824
Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532
| || || || ||||||| | | | ||||| ||| || |||| |||
Sbjct 17823 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCT 17764
Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592
||| || | ||||| ||||| || || |||| | | || || ||||| |||||
Sbjct 17763 AAACAAACAAATCTTCGAAACTATTTACCATGCCACTCTTGAAGCCTCCTGTGAATTGGC 17704
Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651
|||| |||| ||| || ||||||| ||| || || || ||| |||| | || |
Sbjct 17703 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCCAAGGGTATTTTAC 17645
Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711
| || ||| | ||||| | | |||| || | ||| | ||||| || || |
Sbjct 17644 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGG 17585
Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771
|| || || ||||| | ||||| | || || || ||||| || || || |
Sbjct 17584 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 17525
Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831
|| | || || || || | || || || |||||||| | || || | || || |
Sbjct 17524 CTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACCAGTGACCTCAAACATGTACTCTC 17465
Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891
| || || || || || ||||| | || |||||| || || | ||| | ||
Sbjct 17464 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 17405
Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951
||| || | |||| ||| || ||||| | ||| | || | ||||||||| | |
Sbjct 17404 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 17345
Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011
| | | ||| | ||| |||| ||||| | ||||||||||| |||||||| |
Sbjct 17344 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAATTATACAAAACCGTCTGGGAAATCT 17285
Query 365012 C 365012
|
Sbjct 17284 C 17284
>seq513
Length=30347
Score = 122 bits (134), Expect = 2e-22
Identities = 339/515 (66%), Gaps = 34/515 (7%)
Strand=Plus/Plus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | | ||||| || ||| || |
Sbjct 11926 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 11984
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| ||| ||||| || || ||||| |||||||||||| | || ||||||||
Sbjct 11985 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 12044
Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596
| ||||| || ||| | ||| ||| | ||| || | ||||||||| | | ||
Sbjct 12045 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 12103
Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655
||| || || | |||| || ||| || | | | || ||||||||||| ||||||||
Sbjct 12104 ATTCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 12162
Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711
| || || || |||||||| | || ||||| ||| || | | ||||| ||||
Sbjct 12163 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTCAG 12222
Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748
| | | | | |||| ||||||||| | |||| || ||
Sbjct 12223 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 12282
Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808
||| |||||| || | || || || ||||| |||||| || || | | ||| |
Sbjct 12283 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 12342
Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868
| || ||| | || | | | || ||||| |||||||| | | || |||||
Sbjct 12343 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 12402
Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903
|||||||| | | ||||||||||||| ||| |||
Sbjct 12403 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 12436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303344348633228
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