Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766185.2_202014-10- 12] 554 sequences; 11,624,690 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq438 268 1e-66 seq275 154 2e-32 >seq438 Length=34054 Score = 268 bits (296), Expect = 1e-66 Identities = 893/1372 (65%), Gaps = 42/1372 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 10982 GGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 10923 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || || || | | | || ||| | | | |||| | || ||| || ||||| Sbjct 10922 ATGGTCAAGGAATTT--CTAATACCATGCTTCATGATATCTTTTCTTAAGGTG-TCCCAA 10866 Query 106070 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTG 106129 || | || | || || |||||||||||||| || || | ||||| || | Sbjct 10865 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCA 10806 Query 106130 GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | ||| | |||| ||| | |||||| || | Sbjct 10805 GGAGATCCTTGGAAAGTTTCGTATGGACCGTC--CTTCTGAGCTAGTTCACAAGAAGCTT 10748 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| ||| || ||||| || ||||||||||| | ||| | | |||||| || | Sbjct 10747 CCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAG 10688 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||||||| | || ||| || || || ||||||||||||||||||||| ||| Sbjct 10687 AATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAA 10628 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | ||||| |||| |||||| || |||| ||| ||||| || || |||| | |||| Sbjct 10627 TTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 10568 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 |||||| ||||| ||| ||||||| || | |||||||| | ||||| | | Sbjct 10567 TGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGT 10508 Query 106428 AAGTGCGAGTCT---------------CTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| ||||| |||| ||| || | ||| | ||| | || | Sbjct 10507 ATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGC--TGGTAAGGCAACGGAAG 10451 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| || |||||||| || ||||| | ||| ||| || | |||||| || |||| Sbjct 10450 CCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGT 10391 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || ||| || || || || ||||| ||| ||| |||| || |||||||||| Sbjct 10390 TTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGT 10331 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGG 106652 | | | | | || || || || || || || | | | ||| | | ||| | || Sbjct 10330 AAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTT 10272 Query 106653 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 || | | || | || | || || || |||||| || || || || |||| Sbjct 10271 TGG--GCTTTGATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAA 10214 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCAT 106771 |||| ||||| ||| | ||| || || ||| |||| |||| | | ||| Sbjct 10213 ACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGAATAATGTCCAG 10155 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831 ||| || || || |||||||||||||| || |||||||| || | | || | | Sbjct 10154 GTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAA 10095 Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGAT 106890 ||||| ||| || || | ||| ||||| || ||| |||| || || | ||| Sbjct 10094 TCTCTTGCACGAATTTCCTCTTTACCGTGGTT-CTTCCTAATATCAATAAAATCAAAGAT 10036 Query 106891 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTT 106946 ||| || |||||||| || || || | || | | || |||| | ||| | | Sbjct 10035 ATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTT-TATTACCACCCT 9977 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 | | ||||| || || ||| || || || |||| ||| ||||| | ||| | || Sbjct 9976 GGTCAACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAG 9917 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 ||| ||||| || ||| ||| | | | | | | |||||| || | |||| Sbjct 9916 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 9857 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 |||| ||||| || || || ||||| ||| | | || | || || || | || Sbjct 9856 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGA 9797 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 107186 | ||||||||||| |||| | | ||| ||| |||||| || ||| |||| ||||| | Sbjct 9796 TAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGG 9737 Query 107187 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTC 107245 ||||||| | ||||| | |||||| | || ||| || | |||||| || || || Sbjct 9736 CATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCAAGTTATACGTT 9678 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 || || ||| || || ||| ||||||||||| | || || | ||||| Sbjct 9677 TCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAA 9626 >seq275 Length=24457 Score = 154 bits (170), Expect = 2e-32 Identities = 871/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || |||||||||| ||| | ||||| | || ||||| ||||||||||||||| Sbjct 17488 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 17547 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | | || | || ||| | || ||| || ||||| Sbjct 17548 ATAGTCAAAGA--GTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTT-TCCCAA 17604 Query 106070 TCGTAGTTGAGCT-TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | |||| ||||||| ||||| | | || | ||| | Sbjct 17605 TCCCACATGCCAAATGGTTTAGCGTTCC-ACATATCGAATTGTAAAATACCCTTGGAAGC 17663 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 |||||||| ||||| || ||| ||||| || |||||||||||| || || Sbjct 17664 TGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTC 17723 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || || || || ||||| ||||| | || | | ||||| || || Sbjct 17724 AAGAGTGGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGA 17783 Query 106249 ATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | |||| ||| || ||| | ||| || | ||| || ||||| | | ||| Sbjct 17784 TTCAAAGG-GTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAA 17842 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGT 106364 ||||||| || |||||| || |||| || ||| ||| ||||| |||| | || Sbjct 17843 TAGGTCTATGCTTCATATTTGAATTTCTAGC---CTCGGGAACTGGATAGTAATTACGGT 17899 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | || |||| ||| | || | ||||| | || | || || || | | | || ||| Sbjct 17900 CGATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAAT 17959 Query 106425 CAAAAGTGCGAGTCTCTTCATTGAC--ATACTT----------TGGAAGGGCGATTGATG 106472 | | | ||| | ||| | | || | ||| ||||| || || | Sbjct 17960 TATAGCTTGCAGTTTTACCATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAG 18019 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 | ||||| ||||| || || |||||| | || || | ||||| ||| || | Sbjct 18020 CTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAAT 18079 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 | || || || || || || |||| |||||| |||| |||| || || ||||| | Sbjct 18080 TAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTAT 18139 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACACATCG 106651 | | |||| | || || || || || ||||||| |||| | ||| || | ||||| | Sbjct 18140 AAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAATGGCATACCACAACTTT 18198 Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711 |||| ||| | || | || || || ||||| || || || ||||| Sbjct 18199 TGGGCTTT---AATTGTTTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCA 18255 Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA-AGAGACCA 106770 || || |||||| | | || | |||||| || |||| | ||| | || ||| Sbjct 18256 AATTCATCACCCCACACATCATCTAAACCTGGGGCAGCA-CTGGGCGAAAACAAAGTCCA 18314 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | ||| |||| | ||| || ||||||||||| || || ||||| || | | || | Sbjct 18315 AGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAA 18374 Query 106831 ATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 106890 |||||| ||| ||||| | ||| || | || | || | || || | ||| Sbjct 18375 ATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGAT 18434 Query 106891 ATCCGCGTGCCATGGCTC-AAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCT 106945 ||| || ||||||||||| |||| | | |||| || || || | | || | | Sbjct 18435 ATCTGCATGCCATGGCTCCAAGAAA-AGGGCGAAAGCACCAGGTCTCTTGTTACC-ACCC 18492 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || || || || || |||| ||| ||||| | || | ||| Sbjct 18493 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 18552 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 ||| || || || ||| ||| ||| | | | | ||| || | ||| Sbjct 18553 GTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCA 18612 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 | ||| || || || || || ||||| || | | ||| |||| ||||| | | Sbjct 18613 ACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCG 18672 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||||| ||||| |||| || | ||| || ||||| || || ||| |||||| Sbjct 18673 ATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCA 18732 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | ||||||||||| || ||| |||||| | || || Sbjct 18733 GCGTTGAATAAAGTTGGGGAAGCGTGAATGAA-GTATCTTAACGACATCAAATTATAAGT 18791 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || ||||| || || || || ||||| || | ||||||||||| Sbjct 18792 CTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 18842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976714382960