Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766185.2_202014-10- 12] 554 sequences; 11,624,690 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq224 98.7 9e-16 >seq224 Length=44098 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||||| | | ||||| || ||||||||||| || || || | ||||| ||||| Sbjct 27227 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 27168 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||| | |||| | | |||||||||||||| || ||||| || || |||||| Sbjct 27167 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 27108 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 || | | || | ||||||| | || ||||| | || | |||||||| || Sbjct 27107 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 27048 Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 || ||| || | |||||||||||| | |||||| Sbjct 27047 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 27014 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| ||||| || | | || || ||||| ||||||||||| || ||| | ||| Sbjct 27692 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 27633 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || || ||||| | | | || | | ||||||||| ||||| || ||||||||||| Sbjct 27632 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 27573 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | || | ||| |||| | || || || | || | || Sbjct 27572 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 27513 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||||||| |||||||| ||||| Sbjct 27512 CTTCCCTGTTAGAGTTTTGATGAAAATTTGCAT 27480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476607899467440