Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766185.2_202014-10- 12] 554 sequences; 11,624,690 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq438 381 8e-101 >seq438 Length=34054 Score = 381 bits (422), Expect = 8e-101 Identities = 1385/2146 (65%), Gaps = 55/2146 (3%) Strand=Plus/Minus Query 68370 CAAT-GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 |||| ||||| ||||| | | ||||| | || || | | ||||||||||||||| | Sbjct 11383 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 11324 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGG 68488 ||| || |||||||||| |||||||||||||||||||| | |||| || Sbjct 11323 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGG---GG 11267 Query 68489 CTA-TATGAATA--TTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCA 68545 | || ||||| |||| || ||| |||||| || | | | ||| || |||| Sbjct 11266 CACGTAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 11207 Query 68546 TTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT 68605 | || || ||| ||||||| | ||||||||||| |||||| | | | || | || | Sbjct 11206 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAATTCTT 11147 Query 68606 CTGGAAGGCTCG-TATT--TTGAATGGATCCACCATCGGATATAATTATATTCT---TGA 68659 ||||| | | || ||||||||| ||| | | |||| | || || | | Sbjct 11146 GTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTCA 11090 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | |||| ||| | | || || | | || | | || || || | | Sbjct 11089 TACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCT 11030 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||| || ||||| || | ||| | ||| ||||| || |||||| | | ||| Sbjct 11029 GGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATT 10970 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 |||||| |||| ||||| | || |||||||| ||||| ||||||| || || Sbjct 10969 CATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAAT 10910 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTT----AGATGTTTCCAATCCCAAAGATCA 68895 |||||| |||||| | ||||| ||||||| || ||| ||||||||| | | Sbjct 10909 TTCTAATACCATGCTTCATGAT---ATCTTTTCTTAAGGTGTC-CCAATCCCACATGCCG 10854 Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA 68955 | ||| | ||| | ||| | ||||| || || | | ||| ||||| | Sbjct 10853 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 10794 Query 68956 TATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAA 69015 | ||||| || || || |||| | ||||||||||||| || || | | | | | Sbjct 10793 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 10734 Query 69016 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAA 69075 ||||| ||||| || || | |||| || | ||||| | ||| ||||| || Sbjct 10733 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 10674 Query 69076 TGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTC 69135 |||| || || || | || || | || ||||| || | | | || |||||||||||| Sbjct 10673 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 10614 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 10613 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 10554 Query 69196 TTTCGGACTACTACTTTAAC-----CACGTCCTTT-----AGTT---TGAGAAAATCAAA 69242 || || || |||||| | || || ||| |||| || | || || | Sbjct 10553 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 10494 Query 69243 TCGTCCATCTATAA----CAAACATATTCAGT----GCTACAGATGCTAGATTACAAACT 69294 | ||| || | || ||| | || | | || || || || | |||||||| Sbjct 10493 CCATCC-TC-AGAAGTTTCAATGA-ATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACA 10437 Query 69295 GCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATA 69354 || |||| | | || |||| | || || |||| || | ||||| Sbjct 10436 GCAGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATG 10377 Query 69355 GTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGA 69414 || | |||| |||||| ||| ||||||| || |||||||||| || || || Sbjct 10376 ACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGT 10317 Query 69415 GTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG 69474 |||||||||||| | |||| ||| | ||| || | ||| | || || || Sbjct 10316 GTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATA--- 10260 Query 69475 GTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAA 69534 ||||| ||| ||||| || || | |||||||| || || || || || || Sbjct 10259 GTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAA 10200 Query 69535 ACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTA 69594 ||| || |||||| | ||||| | | |||| ||| ||| || | Sbjct 10199 CAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCG 10140 Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || ||||| || ||||| |||||||| ||||| || | |||||| | | | || Sbjct 10139 ACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 10080 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || ||| ||| | ||| || | ||||||| |||||||||| Sbjct 10079 TCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGT 10020 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || | || | | || |||| |||||| || ||||| || | || | ||| Sbjct 10019 TCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCG 9960 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 |||||||| | || | | ||| ||||| | ||| ||||| |||| ||||| |||| | Sbjct 9959 GTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCA 9900 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || ||| || ||| ||||| ||| ||| |||||| || || || || |||| Sbjct 9899 ATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTG 9840 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954 || || | |||||| ||||| ||||| || || ||||| || || || ||||| Sbjct 9839 GAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATG 9780 Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014 || | ||||| ||||||||| | | | ||| || ||||| || || || ||| Sbjct 9779 GCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGA 9720 Query 70015 GATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATA 70074 || |||||||| || ||||| ||| | || || || ||||| | ||| | || ||| Sbjct 9719 GAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATA 9660 Query 70075 TC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 || | || | || || |||| ||||| | ||| | | ||| || || ||||| | Sbjct 9659 TCTCTACCG-TGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCGAC 9601 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 || | || ||| | | | || || ||||| ||||||||| |||||||| |||| Sbjct 9600 TTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTA 9541 Query 70194 -TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTA 70252 |||||| ||||| || || | ||| | || || | ||||||||| | || | || | Sbjct 9540 CTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAA 9482 Query 70253 TATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGT 70312 ||| ||| | ||||| || |||| | |||||| | || ||| || || Sbjct 9481 TATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 9422 Query 70313 TGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATA 70372 | | | |||||| | || | | |||| ||||| | |||| || |||||||| || | Sbjct 9421 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 9362 Query 70373 TGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTA 70432 |||| ||||| || ||||| | || || || ||||| ||||| | ||| | Sbjct 9361 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATGAACAGTAGTCATATAAGCGCATG 9302 Query 70433 TTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||| || ||||| | |||| ||| || ||||| || || | ||| Sbjct 9301 TTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATA 9256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904043156560