Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766185.2_202014-10- 12] 554 sequences; 11,624,690 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq438 253 2e-62 seq275 132 6e-26 >seq438 Length=34054 Score = 253 bits (280), Expect = 2e-62 Identities = 868/1339 (65%), Gaps = 38/1339 (3%) Strand=Plus/Plus Query 104266 AGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACG 104324 ||| || || ||| || || || || || |||||| | || ||| || | ||||| Sbjct 9657 AGATATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTT-ACTCACG 9715 Query 104325 CAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTA 104384 | | ||||| | |||||||| ||||| |||| ||| ||||||||| ||| ||| | Sbjct 9716 CCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGG 9775 Query 104385 TCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAA 104444 | |||| ||||||||||| ||| | || || || | || | | ||| ||||| | Sbjct 9776 TTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGA 9835 Query 104445 TCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTC 104504 | || || ||||| |||||||| | || |||||| | | | | | | ||| Sbjct 9836 TTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTT 9895 Query 104505 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 104564 ||| || ||||| ||| || | ||| | ||||| ||| |||| || || || Sbjct 9896 ACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATA 9955 Query 104565 CCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTAT 104620 ||| || || ||||| | || | ||| | |||| || | | || | || Sbjct 9956 ACACCGCCCGTTATGTTGACCAGGGTGGTAAT-AAAAGACCTGGTGCGTTTGCCCTTTAC 10014 Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680 || || |||||||| || |||||| | || || |||| | | ||||| ||| | Sbjct 10015 CTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 10074 Query 104681 GAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739 ||||| | |||| | ||| | ||| | ||||| |||||||| ||||| |||||||| Sbjct 10075 GAGGAAATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAA 10133 Query 104740 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCT 104798 | | || || || | ||| | ||| | | || | |||| ||| || |||||| | Sbjct 10134 GCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCA-ACATCAGCTCCTGGTTTAA 10192 Query 104799 CCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG 104858 |||| ||||| |||||||| || || || || |||||| |||||||||| | Sbjct 10193 GCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTG 10252 Query 104859 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 104918 | ||| | ||| | | ||| | | ||| | | ||||||| || | Sbjct 10253 ---GTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAA 10309 Query 104919 CTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 104978 |||||||||| | | | ||||||| || || |||||| ||| ||||||||| || | Sbjct 10310 CTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACT 10369 Query 104979 TGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | ||||| |||||| || || | || ||||| | |||| ||| ||||| Sbjct 10370 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATG 10429 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGG 105086 | || ||||| |||||| | || || | || | || | | || || Sbjct 10430 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGCATTCATTGAAACTTCTGAGG 10489 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 || |||| |||| | | ||||| | || ||| || | ||| ||| || Sbjct 10490 ATGGTAAGACTTCCACATACAACTTCAAAAAATTACATGAAATTGCTAAAGTTGTTACTC 10549 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 105206 || |||||||||| |||||| | |||| ||||| ||||| || | ||||| | Sbjct 10550 GTAATTTAAACAGAGTCATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAAATCCA 10609 Query 105207 ATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTT 105266 |||||||||| | ||||||| | | |||||||| |||||||| || ||||| || | Sbjct 10610 ATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTCTCGCTGACACTTTCATGCTGT 10669 Query 105267 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCA 105326 || |||||||||| || ||||| | ||| | || ||||| || | Sbjct 10670 TACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTGCTAAATATCCAAATCTTTGAAACTA 10729 Query 105327 TGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAA 105386 | ||||| ||| | | || || || || | || || || |||||||| |||| Sbjct 10730 TTTATCATGCCTCCATGGAAGCTTCTTGTGAACTAGCTCAGAAGGACGGTCCATACGAAA 10789 Query 105387 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || | || ||||| ||||| ||||| | || || ||||||||||||| | | | Sbjct 10790 CTTTCCAAGGATCTCCTGCTTCTCAAGGTATACTACAGTTTGATATGTGGG-ACCAAAAA 10848 Query 105447 CCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCG 105504 || | || | || ||||| | || ||| || | |||| | || | ||| || | Sbjct 10849 CCCTACGGCATGTGGGATTGGGACAC-CTTAAGAAAAGATATCATGAAGCATGGTATTAG 10907 Query 105505 TAACAGTCTCCT----CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 105560 || |||| |||||| |||||||| || || ||||| | ||||| |||||| Sbjct 10908 AAA----TTCCTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTT 10963 Query 105561 ATAATGAATGCTTTGAACC 105579 |||||||||| || ||||| Sbjct 10964 ATAATGAATGTTTCGAACC 10982 >seq275 Length=24457 Score = 132 bits (146), Expect = 6e-26 Identities = 875/1376 (64%), Gaps = 54/1376 (4%) Strand=Plus/Minus Query 104237 ATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 104296 ||||| ||||| | ||||| ||||| || || || ||||| || |||| || | Sbjct 18842 ATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAAT 18783 Query 104297 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 104355 |||||| ||| || ||||||||||| | ||||| | ||||| |||||||| || Sbjct 18782 TTGATGTCGTTAAGATAC-TTCATTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCC 18724 Query 104356 AAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 104415 | || |||||||| || ||| | || |||| ||||| ||||| ||| | ||||| Sbjct 18723 ACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTAT 18664 Query 104416 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 104475 |||| ||| | | || ||||| || || || || || ||| |||| | || Sbjct 18663 TTATGATACTTTGAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCA 18604 Query 104476 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 104535 ||| | | | | ||| ||| ||| || || || ||| ||| | || Sbjct 18603 TATCAACAACATCCGTTCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGG 18544 Query 104536 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCG 104595 | ||||| ||| |||| || || || || || || ||||| | || | | || Sbjct 18543 GTTGATTCCTATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGT-GGTA 18485 Query 104596 TCGAAAG----GGATCTATCGCAGTCTATCTT-GAGCCATGGCACGCGGATATCATGGAG 104650 | | || || || |||| | | |||| ||||||||||| || |||||| | || Sbjct 18484 ACAAGAGACCTGGTGCTTTCGCCCT-TTTCTTGGAGCCATGGCATGCAGATATCTTCGAC 18426 Query 104651 TTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTC 104709 || | || | | | || ||| | || || | |||| | ||| | ||| | Sbjct 18425 TTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATTC-GTGCAAGAGATTTGTTCCC 18367 Query 104710 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 104769 ||||| ||||| || ||||| |||||||| | ||| | ||| ||| |||| || | Sbjct 18366 TGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTT 18307 Query 104770 CTTTT-GTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 104828 |||| | |||| || || ||| | |||| |||||| || ||||||| | Sbjct 18306 GTTTTCGCCCAG-TGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAAC 18248 Query 104829 TTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 104888 | || || ||||| ||||||||| | | || | ||| | ||| Sbjct 18247 TATATACTCGTTACGAAAGAGAAGGTCGTG---GTAAAACAATTAAAGCCCAAAAGTTGT 18191 Query 104889 GGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 || | || ||| | |||| | || || || || |||||||| | |||| |||| || ||| Sbjct 18190 GGTATGCCATTTTGCAAG-CACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGAC 18132 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || |||||| |||| || ||| |||| || ||| ||||| || ||| | ||| Sbjct 18131 GCATGTAACAGGAAGACAAACCAACAGAACTTAGGTACTATCAAATCATCTAATTTATGT 18072 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 |||||| | |||| | | | ||||| || || || ||||| | || || || Sbjct 18071 TGTGAAATCGTCGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATT 18012 Query 105068 GCTCTCCC--CA--AGTATGTGGATCCAGA----GACAAA-----GACATTTGATTATGA 105114 || || || || || || || | |||| | ||| | | | ||| || Sbjct 18011 GCCCTACCAGCATTCGT-TGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA 17953 Query 105115 AAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAA 105174 | | | ||||| || | ||| | ||| | ||| | ||||||||||| || | || Sbjct 17952 GAGATTACACGAGATTGCTAAAGTCATTACCCACAACTTGAACAGAGTTATCGACCGTAA 17893 Query 105175 TTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 105231 || || || ||| ||| ||| | || || ||||||| || | || |||| ||| Sbjct 17892 TTACTATCCAGTTCCCGAG---GCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCT 17836 Query 105232 CGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGA 105291 ||||| |||||| | || ||| | || | | || | | ||||| || || || Sbjct 17835 TGGTGTCCAGGGTTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGA 17776 Query 105292 AGCGAAGGAAATC--AATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349 ||| | || || || | || || || || || || || ||| ||||||| || Sbjct 17775 AGCTCA--AACTCTAAACAAACAAATCTTCGAAACTATTTACCATGCCACTCTTGAAGCC 17718 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 | || ||||| | || ||| |||| || ||||| |||||||||||||| Sbjct 17717 TCCTGTGAATTGGCCCAAAAAGAAGGTAAATATTCTACTTTTGAAGGTTCTCCAGCTTC- 17659 Query 105410 CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGG 105467 |||||| | | ||||| ||||||| |||| | | |||| || | || |||| Sbjct 17658 CAAGGGTATTTTACAATTCGATATGT-GGAACGCTAAACCATTTGGCATGTGGGATTGGG 17600 Query 105468 AAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 || | || ||| || | || | || | | |||| | | ||| | | ||||| Sbjct 17599 AAAC-CTTAAGAAAGGACATTGTTAA--ACATGGGT-TAAGAAACTCTTTGACTATGGCA 17544 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||||||||||| ||||| || | ||||| | ||| |||||||||| || ||||| Sbjct 17543 CCAATGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACC 17488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256760918960