Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10-
12] 670 sequences; 11,556,258 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq474 140 6e-28
seq612 100 6e-16
>seq474
Length=30177
Score = 140 bits (154), Expect = 6e-28
Identities = 233/335 (70%), Gaps = 20/335 (6%)
Strand=Plus/Plus
Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353
|||||||||| || |||| | || ||| | || | || ||| ||| |||||| ||
Sbjct 11719 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 11777
Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413
|| |||| ||| || | | ||||| | ||||| || |||||| |||| |||||
Sbjct 11778 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 11837
Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473
|||||||| |||||| | |||||||||||| |||| | || || | ||| ||||||
Sbjct 11838 TACGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 11897
Query 35474 GGAAAGGGTATTGATCAATTG-GCCA--------ATATACTAAAGACCCTGAGAGAAAAT 35524
||| | ||||||||||||||| || ||| ||||||||| ||||
Sbjct 11898 GGACAAGGTATTGATCAATTGAAACAGGTTATTCATAAACTAAAGAC---------AAAT 11948
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| | |||||||| || ||||||| || ||||| || ||| || || ||||||
Sbjct 11949 CCCTACGATAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCT 12008
Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| || |||||||| || | | ||||| |||||
Sbjct 12009 TTGCCGCCATGCCATATTTTTTCACAATTCTATGT 12043
>seq612
Length=38638
Score = 100 bits (110), Expect = 6e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| | ||||||| |||| || ||| | || || ||||||||||||
Sbjct 382 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 323
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||||| |||| ||| | |||| ||||| || || || | ||| |||
Sbjct 322 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 263
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|||||| | || ||||||||||||| || ||||
Sbjct 262 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTT 228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989575505039850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |