Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10-
12] 670 sequences; 11,556,258 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq268 113 4e-20
seq645 82.4 6e-11
>seq268
Length=40227
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || ||||||| ||| | ||||| |||||||| || ||||| || | |
Sbjct 12263 CCACCTCTCAATCTCAACACCARGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12322
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || || || || ||||| ||| |||| | |||||| |||||| ||
Sbjct 12323 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 12382
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || ||||| || |||||| ||| || | | | | ||| ||| || ||
Sbjct 12383 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 12442
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || || ||||||| ||||||||| |||||||||||
Sbjct 12443 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 12489
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| | ||||| ||| | || || || |||||||| ||||| |||||||| | |
Sbjct 12947 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 13006
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | |||| || ||||| ||||| ||| | || | ||| || ||||| ||
Sbjct 13007 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 13066
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| ||||||| || || | | ||| |||||| || || |
Sbjct 13067 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 13126
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct 13127 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 13173
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 18812 TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCC 18871
|| || || | |||||| || || | ||| | || |||||||||||||||||||| |||
Sbjct 12032 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 12091
Query 18872 GCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACG 18931
| || ||| | | || || || |||||||| ||| | || | ||| ||||| ||
Sbjct 12092 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGA 12151
Query 18932 GGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCC 18991
|| | || || ||||| |||||| || || | | | | ||| || || ||
Sbjct 12152 GGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCA 12211
Query 18992 GTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || || |||||||| | || ||||| |||||||||||
Sbjct 12212 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACRAAAATTTGCAT 12261
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || ||||||| |||||||||||||| || ||||| || ||||| | |
Sbjct 12491 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 12550
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | |||| ||||| |||||||| ||| | || | ||| || ||||| ||
Sbjct 12551 AGCGTTCTACCGTCTTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 12610
Query 18935 ACGCCCTCTTTGTCGGCAATTTTC 18958
| || || ||||| |||||||
Sbjct 12611 ATACCTTCCTTGTCTTGAATTTTC 12634
>seq645
Length=23082
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||| ||| || || |||| ||| | ||||| |||||||| || ||||| || | |
Sbjct 13983 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 14042
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| ||| | | || |||| || ||||| ||| | || | ||| || || || ||
Sbjct 14043 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 14102
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| || || || || | | | | ||| || || || |
Sbjct 14103 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 14162
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | |||||| || ||||| |||||||| ||||| ||||||||||| ||
Sbjct 14163 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 14212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414569414753980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |