Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10- 12] 670 sequences; 11,556,258 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq612 147 2e-30 >seq612 Length=38638 Score = 147 bits (162), Expect = 2e-30 Identities = 510/782 (65%), Gaps = 39/782 (5%) Strand=Plus/Plus Query 12917 TTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTTACACCCTAATTCTAG 12975 |||||||| |||||||| || |||| ||| | |||||||| || || || | | Sbjct 3 TTTTCCATGAAATCGAAGGGGTTTT-CGACCTTGTAGTATTTCTTGTTACCGAAAGCGAC 61 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 |||| |||||| || || ||||| | ||| || |||||||| ||| |||||| |||| Sbjct 62 CAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAG 121 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTATATCAACTGCTTCGAT 13092 || || || | || || || |||| ||| ||| || || || || ||| | Sbjct 122 CAAAGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGT 178 Query 13093 AACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCA 13148 || || | | | | || | || || |||| | | ||| |||| || Sbjct 179 GACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCAAATGGGCGAACAACA 234 Query 13149 TACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTA 13208 |||||||| || |||||| ||||| ||||||| || | ||||| ||||| |||| Sbjct 235 AGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTA 294 Query 13209 GACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaa 13268 ||| ||||| | |||| ||||| | ||| || || | ||||| ||||| || |||| Sbjct 295 AACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAA 354 Query 13269 aTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCT 13328 | | ||||||| | ||||| || | | ||||||||| || | | ||| Sbjct 355 AGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA-AGGCGTCAGCGTCT 413 Query 13329 CT-ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC----ATATTTTCTAT 13383 ||||| || ||||| | || || | || | ||| || | | || Sbjct 414 TGGATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTCTGGGATGGTGTGAAT 469 Query 13384 TGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCT 13443 || || || || | | |||| ||| ||| || |||||||| ||||| ||| Sbjct 470 GGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGA 529 Query 13444 ATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTC 13503 || |||| || ||||||||||| ||| ||||||||||| || |||| | ||||| Sbjct 530 GTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTC 589 Query 13504 TGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACT 13563 || | || ||||||| | | || |||| | |||||||| ||||| || |||||| Sbjct 590 TGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGA 649 Query 13564 AGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---tttttttCGTT--TTCTGAC 13615 ||| || ||||| ||||| | || | | |||| | || ||||| ||||| Sbjct 650 AGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTG-- 707 Query 13616 AACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAA 13675 || ||| || | | ||| || || ||||| | || ||| ||||||| |||||| Sbjct 708 ---TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAA 764 Query 13676 GC 13677 || Sbjct 765 GC 766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430978880759340