Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10-
12] 670 sequences; 11,556,258 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq645 141 8e-29
seq268 134 1e-26
seq214 116 3e-21
>seq645
Length=23082
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || || |||||||||||||| || | || || ||||| ||| |
Sbjct 14212 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 14153
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| || || ||||||||||| ||||||||||| ||
Sbjct 14152 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 14093
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || ||| | || | ||||| |||
Sbjct 14092 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 14033
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||| || |||| || || ||| ||||| | || |||
Sbjct 14032 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 13982
>seq268
Length=40227
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | ||
Sbjct 13173 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 13114
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || ||||||||||||||||| ||||| || || ||||||
Sbjct 13113 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 13054
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || ||| |||| || | || | || |||||||||
Sbjct 13053 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 12994
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
||||| || || |||||| |||||
Sbjct 12993 ATTCAGAAGGAGTCCACCTTACAT 12970
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || ||
Sbjct 12945 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 12886
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || ||||| || |||||||| ||||| || || ||||||
Sbjct 12885 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 12826
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| |||| || | ||| | || || ||||||
Sbjct 12825 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 12766
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 12765 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 12718
Score = 111 bits (122), Expect = 1e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||| |||| || || || | || || || || ||| | ||
Sbjct 12489 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 12430
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| ||||||||||| || || ||||| || || ||||||
Sbjct 12429 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 12370
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || || |||| ||| | ||| | || || ||||||
Sbjct 12369 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 12310
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || | || ||| ||||| | || |||
Sbjct 12309 ATCCAAAAGGAATCTACTCTTCACYTGGTGTTGAGATTGAGAGGTGGT 12262
Score = 102 bits (112), Expect = 7e-17
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || ||||| || | || || || || ||| | |
Sbjct 12261 ATGCAAATTTTYGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 12202
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || |||||||||||||||||| |||||||| || || ||
Sbjct 12201 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 12142
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| ||||| |||| ||| | || | || || |||||
Sbjct 12141 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 12082
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || | || ||| | ||| | || |||
Sbjct 12081 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGGT 12034
Score = 98.7 bits (108), Expect = 8e-16
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||||||||||||||| |||||||| || ||||||||| | | || |||||||| |||
Sbjct 12633 AAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAA 12574
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| | || || | || | || ||||| |||||||| ||||| || || | |||
Sbjct 12573 CAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCAT 12514
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||| ||||| | || |||
Sbjct 12513 TTGGTGTTGAGATTGAGAGGTGGT 12490
>seq214
Length=78881
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| ||||| ||||| || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 61801 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 61742
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| || |||| || || ||||||||||| ||||| ||||| || |||||| | |
Sbjct 61741 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 61682
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407
|| ||||| || || || || || || | || | || || |||||||| |||||
Sbjct 61681 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 61622
Query 22408 GAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||| ||||||| || ||| ||||
Sbjct 61621 GAATCCACTTTACATTTGGTCTTGAGATT 61593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419724572658550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |