Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10-
12] 670 sequences; 11,556,258 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq268 179 7e-40
seq645 178 2e-39
seq214 165 2e-35
>seq268
Length=40227
Score = 179 bits (198), Expect = 7e-40
Identities = 172/218 (79%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| |||||||| || || ||||| ||||| || || || || || |||||||
Sbjct 12966 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 13025
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || | ||||||||| || || || || ||||||||||||||||
Sbjct 13026 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 13085
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| |
Sbjct 13086 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 13145
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
| || | ||||||||||| |||||||| || ||||||
Sbjct 13146 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 13182
Score = 152 bits (168), Expect = 9e-32
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || | ||| || |||||||| ||||| || || || || || || || || |||||
Sbjct 12049 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 12108
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| || || ||||| || || | |||||| ||||| || ||||| |||||||||||
Sbjct 12109 TTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 12168
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| |||| ||| ||| || || ||||| | ||||| || || | ||| || ||
Sbjct 12169 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 12228
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || |||||||| || || |||||
Sbjct 12229 CTTACCTGTCAGTGTCTTGACRAAAATTTGCAT 12261
Score = 145 bits (160), Expect = 1e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || | || || || ||
Sbjct 12733 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 12792
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| ||||| || || | || ||||| || || || || |||||||||||
Sbjct 12793 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 12852
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || | ||| ||| ||||| ||||| | ||||| || || || ||||||||
Sbjct 12853 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 12912
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | ||||| || || ||||||||
Sbjct 12913 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12945
Score = 125 bits (138), Expect = 1e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||| ||| || || || || ||||||||||| || || || | || || |||||
Sbjct 12277 CAACACCARGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 12336
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| || || || || | ||| ||||| || || || || ||||| || ||
Sbjct 12337 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 12396
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || |||||| || || ||||| | ||||| || || | ||| || ||
Sbjct 12397 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 12456
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || |||||
Sbjct 12457 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 12489
Score = 113 bits (124), Expect = 8e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || | ||| |||||||| || ||||||||||| || || || || || ||
Sbjct 12505 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 12564
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | || || ||||| || || | ||||||||| || || ||||| |||||||||||
Sbjct 12565 TTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 12624
Query 68369 TTGAATCTTTGCCTT 68383
|||||| || | |||
Sbjct 12625 TTGAATTTTCGACTT 12639
>seq645
Length=23082
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 13997 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 14056
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 14057 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 14116
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || ||
Sbjct 14117 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 14176
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 14177 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 14209
>seq214
Length=78881
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| |||| ||||| || ||||||||||| || || || || || || || ||
Sbjct 61598 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 61657
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 61658 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 61717
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 61718 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 61777
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 61778 CTTACCAGTCAAAGTCTTAACGAA 61801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921614681412400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |