Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766195.2_202014-10-
12] 670 sequences; 11,556,258 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq268 104 2e-17
seq484 84.2 2e-11
>seq268
Length=40227
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || |||||||| ||||||||||| |
Sbjct 12719 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12778
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || || || ||||||| | |||| | | |||||| || |||||
Sbjct 12779 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 12838
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| ||||| |||||| || | | || | ||||||| || || |||
Sbjct 12839 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 12898
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||| |||| ||| || ||||| ||||||||
Sbjct 12899 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12945
Score = 102 bits (112), Expect = 8e-17
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||| |||||||| || || | || || ||||||||||||| |
Sbjct 12068 GACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCA 12127
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| | | || ||||| ||||| |||||||| ||||| ||| |||||| ||||
Sbjct 12128 AAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTTGACTTAAC 12186
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | || || ||||| | || | || ||||| ||||| || |
Sbjct 12187 GTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCT 12245
Query 138599 TTACAAAAATCTGCAT 138614
| || ||||| |||||
Sbjct 12246 TGACRAAAATTTGCAT 12261
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470
||||| | | |||||||| ||||||||||| || || || | ||| || || ||
Sbjct 12970 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 13029
Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530
||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| |||
Sbjct 13030 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 13088
Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588
| | |||| ||| || | ||| |||| || || || || | || | ||||||||
Sbjct 13089 TCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 13147
Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| ||| || || |||||||||||
Sbjct 13148 GTCAAAGTCTTGACGAAAATCTGCAT 13173
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || | || | | || |||||||| ||||||||||| |
Sbjct 12263 CCACCTCTCAATCTCAACACCARGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12322
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || ||||| ||||| | | | || | | |||||| ||||||||
Sbjct 12323 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 12382
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| |||| |||| | ||| || | ||||||| || || |
Sbjct 12383 ATACCTTCTTTATC-TTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 12440
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || || || |||||||| || ||||| |||||
Sbjct 12441 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 12489
>seq484
Length=24587
Score = 84.2 bits (92), Expect = 2e-11
Identities = 312/484 (64%), Gaps = 14/484 (3%)
Strand=Plus/Plus
Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146
||||| || |||| |||| || || ||||| | || | ||||| ||||| |||
Sbjct 17485 GGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 17544
Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| |||||| || | || || || |||||| | | || | | |||||||
Sbjct 17545 ATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCC 17604
Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT--AACACTCCTCGACTGGCGG 153264
|||| | | ||| | ||||||||||| ||| | ||| || || | | || || |
Sbjct 17605 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGA--AGCTG 17662
Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324
|| || |||| ||| || | || || |||||||| ||| ||| || || |
Sbjct 17663 GAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAA 17722
Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384
| | ||| ||| || |||||| ||||||||| || ||| |||||||| |
Sbjct 17723 GAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATT 17782
Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444
| | || | |||| || || | | | ||||||| |||||||| ||| | | || |
Sbjct 17783 CAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAG 17842
Query 153445 GTCGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499
||| ||||||| | ||| | | |||||| | | ||||||| ||| || ||
Sbjct 17843 GTCTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTC 17897
Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559
||||| | |||| | |||| | | ||||||| ||| | | | | |||||||||
Sbjct 17898 GATAACTCTGTTCAAGTTGTGGGTAATGACTTTAGCAATCTCGTGTAATCTCTCGAAATT 17957
Query 153560 ATAG 153563
||||
Sbjct 17958 ATAG 17961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496258243802400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |